LOCUS BAM92508.1 4680 aa PRT BCT 10-SEP-2019
DEFINITION Bradyrhizobium oligotrophicum S58 filamentous hemagglutinin
outer membrane protein protein.
ACCESSION AP012603-6487
PROTEIN_ID BAM92508.1
SOURCE Bradyrhizobium oligotrophicum S58
ORGANISM Bradyrhizobium oligotrophicum S58
Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
Nitrobacteraceae; Bradyrhizobium.
REFERENCE 1 (bases 1 to 8264165)
AUTHORS Minamisawa,K. and Okubo,T.
TITLE Direct Submission
JOURNAL Submitted (07-NOV-2012) to the DDBJ/EMBL/GenBank databases.
Contact:Takashi Okubo
Tohoku University, Graduate School of Life Sciences; Katahira,
Aoba-ku, Sendai, Miyagi 980-8577, Japan
URL :http://www.ige.tohoku.ac.jp/chiken/english/e_index.html
REFERENCE 2
AUTHORS Okubo,T., Fukushima,S., Itakura,M., Oshima,K., Longtonglang,A.,
Teaumroong,N., Mitsui,H., Hattori,M., Hattori,R., Hattori,T. and
Minamisawa,K.
TITLE Genome Analysis Suggests that the Soil Oligotrophic Bacterium
Agromonas oligotrophica (Bradyrhizobium oligotrophicum) Is a
Nitrogen-Fixing Symbiont of Aeschynomene indica
JOURNAL Appl. Environ. Microbiol. 79, 2542-2551 (2013)
REMARK DOI:10.1128/AEM.00009-13
COMMENT ##Genome-Assembly-Data-START##
Assembly Method :: Newbler; Phred/Phrap/Consed;
Genome Coverage :: 4.5x
Sequencing Technology :: ABI 3730xl; Roche 454 GS FLX Titanium
##Genome-Assembly-Data-END##
the hybrid assembly of Sanger and 454 data
an oligotrophic bacterium isolated from paddy field soil
FEATURES Qualifiers
source /db_xref="taxon:1245469"
/mol_type="genomic DNA"
/note="synonym: Agromonas oligotrophica S58"
/organism="Bradyrhizobium oligotrophicum S58"
/strain="S58"
protein /locus_tag="S58_65350"
/transl_table=11
BEGIN
1 MAVHRHVSHR AVPARFHRLA WLGCVSALAL FLSGTAIHAR PLGASGASSA AAAASAAASA
61 ASQQAATIAK QSQDAMTKAA AMLKAMQAAQ AAARGIATGS SSNSLNAGLP AVTDGLSTGG
121 LVVDPRVVNA SQAGTATNLW SGADQPVQST GSGQTTVTIK QTASQAIMSW YQFNVGKNTT
181 LVFDQQGNPG WVALNRVDAT GRPSQILGNI KADGTVLLIN PNGIIFGGGS QVNVGSLIAT
241 THDIAGTSTA AASAFSGTSP NYSLQNVTAN GTSYAFAAPA NESSANDYFT QNGLFVTSAA
301 NNNGVAVASG KSAVFVMGDQ TLGSLGGGGI VVQPGASITA NAVGSTTSNG YLALIAPAVT
361 NSGTLTANNG QVILAAGSGI VLAEPSSTAT GVKQALTAVS FAPGTTTVYV NVANGDSITL
421 APAIATKSLA AALPNGGLVT NDGLIVSNDG AVSVVADSIR QLGVIEATTS VTRPGSISLN
481 TYYTTPTANG AIGSIVLGPN SLTTILPDEN SSTIPTGTAT SAYFAANVQP QIAIKASGDV
541 DLQGAADGTG GAFLKAPGAA VELGAGVTIS GGNLAAGTSG TVVLESGSGI DLSGLAGVTL
601 PTSNYLLSFK VTAAEVADTP LARGLIGSTV TIDARLNGTR ADGLSWVGSP LLNAQGYTGL
661 IPETIDELLT VGGKLAITAG QNAIMLPGSS INLSGGYVQY SPGFVGTTRV VGSNGRVYNI
721 GSAPSDLSYG ILGGFTVDHV RWGVSETYAS LLAGGYYDPG YISGRSAGSA SFTSAAPILE
781 GSFASAIVAG ERQRAGLEAM PMGAGLSVAL SGTNSTTYTV LLESGAEAGL DPFGLSTFKL
841 GASWSPTLVR LADGTLAFPV FSDLLTSSAF GSVSIDTGGN AMLQMTADAA LTVLPGGSVT
901 LGNVERIDGT ITARSGSITL TGWTLANGIS QSVALQDLLV TGRLDVSGLW INDSGVDNGS
961 LLGSAYVDAG SVAINTIASS VYTPGSLISS GTTTSGKDFS TSPGNTILTS VTDTTRSIRL
1021 AQGSVIDASS GGYVDRNGSL KNGADRLPLG KGGSVALKTY AGVSSFVVPS YAVAATNILD
1081 NLNNVLVTAG TGFYTFTDNG AGGIQVLPFA DRANTYLEGS IHAQGFAGGG TFTLQAPYIQ
1141 VGGIGAVSYT PGETQSSGVG QINLPTSFFN NSGFGSYALI GLAEANVAAN TALTLKQTNL
1201 LAPAPGSFTG IATNAAKARE LAQAGAVIDG LRKPLNLSLT QSGIDLSQSG LANVTGGVTV
1261 GAGATITADP GATVSIVADQ AVSFKGSVAA GAGATVTMVS NKSSVVVAGS VRAQGGTVNL
1321 ASFGNLTLAA GSMLDVSGVF VPDPTVTRYA TGTVYDGGTV TLLSNNTVEV QPGATINIAG
1381 AAGVIEVPMG RKVQTQAVWS NGGTLQVGAF TAYLGGTLSA AGGAPLAAGG SLSLGDFVLP
1441 GTLAPYSSVF ATAVYNTDTQ SVIGIRSGIL IAQSGLATSA TTVTLTADMI NNSGLGSVTL
1501 AAGGYLQGSP KAATIGFAGS TEIRVPGSLV LHSGSNLLTI LPAGATLANL ANTPASVGGA
1561 TVTLDAGYIR LAGTSLEQAI SPPAAKNMAD GTLSIGSDGV SHGRFVTQWI DLQGDLSLVN
1621 VANAALTTAG AVRLLPGRYG SETVTPTGTS LGGYFVTPGR LTITASEVFP ATNTAYLLMS
1681 TMSVSDSSPT LTIKQYAGSS PTAPLSAGGT LVLDAQNIEQ DGTLWAPLGN VVIGLRSAAD
1741 MPLAVTRSVV ASSATTYSGA LVQTQSVTLG AGGLTAVSTG GFDIPYGYTV DGATWYYGLN
1801 LNANATTTSS NPVTQQTAAP AKSISVFGSS VKLGGSIDAS GGGDVYAVEY VPGTGGTRNV
1861 LLNYQQVSTV TSSGTSTNYS STYADGRQVY ALVPAYEAQV AAYDPVFATY PYYSGKSVTS
1921 AGLVTSGSKL SSFPASAMNN AAGIAPGTSV TLSGGNGIAA GTYVLLPGMY ATLPGAYRVV
1981 QYATSTASSA GSFTGADGSV YVTGSFGNAI TGSRSSQTAL FQLQSQAVWG QYSKINITSG
2041 TSYFSSYAAN NGLAPTALPV DGGLLVIGAT SQLSLGGKNS FAAGSSDLAP AIQGATGQVD
2101 IAAANIAVVA SDRLGQFGTV AANGSFTAST AFSNYLFLDA DQISNFGAGS VLIGGTASVT
2161 SPGAITAIAT NLEVASDAQH PLSGPELILV TQAGGARGLT VDTGSVVSTR GAVSGTSRNI
2221 TLSGDGALLR VSNGSMVSVT RSGATGTGTF TIGTAVGTAQ LVAGAGVVIT AGNSLMIDTS
2281 GSGAFAPDFS GGGGVSTTGV TLKAPNLSIA ANTFNFGPEG LPASGLNLTP GQFNSLFAGA
2341 SSVTLRSNSG FDFYDQTALT LGDAANPIGT LTFDGSGFYS IGSNTTGTGA TDCSAYCATI
2401 AATNITLVNS RGASGVSADP AVVAGAGGTL NLNAAKVITA DAGAKSFGGF SKVNWNAAES
2461 ITFTGTGSLD TAAATATAKF NLSSVSIKSA GTGYTSVPTV TISGTGGTSA TGTALLGIVS
2521 FNVSTTGSGS GYRTGDLVTI KDSVTGATAT GTAVASSTGA IVGINIISGG SGFSGVLANL
2581 TVTVTAGSGT GAAIGTTASP TVGLQPQFGV VGVNVSGGTG YTGVPTVTIS GGGGSGASAQ
2641 AVATLNALTV ANGGTGYTSA PLVTITGGGG SGATATATLG GSGINGLTLT NGGTGYTSTP
2701 TISIWGGSDL TLSAPDVVVK AGANQTVTAR GNLVAQGNGT GVFVGDNSIS GTLALNGASV
2761 TARNGVQIDA AGGKVNLTAA TGDVVLTSGA AINAQGVRLP VNDQFMDAPA GSVQLISSLG
2821 NVSIVGAGID VSNPYAGYAG SLAIQTGNNG TIGTATLAGT LSGAARFNDL GGNFSLLASN
2881 LSGSLPLDGT KPNFSGSFTV TLQTGNIELP AGAVLTSRNV QLTANGGSVN IGGTIDARDL
2941 SGGQISLFGT GTLPSSSSCT TSCGVWIQST ARLLANAVTK DDPTFGRYSS VDNGATNPNG
3001 GTITLATTGT PTAGAYDPTY GFQLVTSANS GWIKVDAGAL LDVSGGPTAP AGQVIVRAPL
3061 LSDSTVNVRF KGNVVTNGST SGGGLALNAY ATWSTMDGTT AGKHFDGIID PAGWFDGTGT
3121 RVAGTVIAGD TISYSTTTTY TAVPTILVGG ASGVAAAIMT TQTGALTVPT ASRGSGFGTA
3181 TRNNCKGGGA TFTCYSDAAM TLNPVVVTLT GGTGGSGLVV TGVTVSAGAV SAVTVSNAAA
3241 IGYTSPVTLT VTGGTTAATV TANLLIAGLV PTNPNTTYAT APTVTANGVA LTAKYTVQQS
3301 YSLSQTTNIA QSIGIFVPTT ANADHVTFYQ STLAGFVQKS LAGSVGAGDG DAFDFASGLG
3361 AILHVRPEIV LSNPSSSINA GNVTVASNWN LGGVKGLTNA TAFTAVNGAS VAPNTVITDV
3421 AGKLLANYTN YTGQLVATAN TPLAYRTAAG EPGVLTVRAV NDVAVKATIS DGFYETRDYF
3481 GGSVAVADLI ANNPALSGKV ADYNTTAAAD LMSRVQGVNN GSFSINLVAG AAFTSNRDTT
3541 ANPYAVTPVS ALTGTRTGNV NVDGHVNSAL VTTPTGTTTA TTFKPSMVPT LVRTGTGSIT
3601 IAAAGNFQLL DKSAPGAVYT AGAATSTPAD FTALAVPLGD NCGGPTCING FLNTPTWAAG
3661 GGSVSITAGQ SIVGVETPVD DASGSQSGKA YQSMMQLWNN WYFHGGWSNG TATPFANCTF
3721 LASCQTAAWI NYASFYQGIG ALGGGNASLV AGSDIKQIGV SLPETLIVAG GLTASDPAHM
3781 ITYGGGNLLV QAGGNLLSSD FLVGLGSGRI NAAGTISADP NSSLSATLVT GNSNATAKSA
3841 NTSPTSKPLD MILGVQNGFI SATAGGSINL LSVYDPAQLA VYSVPSIIMP GGTTPTTSST
3901 WMGSPFTSYG AQSGVSLTAV SGDVTIATAT ALPVVAKGGN ATTGTVTAVT GTSVIGVYPA
3961 TLDVTALNGS IMIGAAAGQV INIVPIPSSA GAALGTLSLM AAQSINIGTS SGISMLDLAT
4021 GASSRYVHGA ATAQSFINPL GQTFADLTQA LHANDPVPVV IAAGQDITMA GNITLIKPAD
4081 MTAGNNIVSE KALSSAIDGV PETNAGLATI TFQNNNVSDV TSLVAGNSII GGSYVLYGPG
4141 SWLIQAGRNI GPLRQSQNGY AGIVAAGNGI NYGTNTDASL SGKLVKYLPN QSADIYVMAG
4201 VKPQRVDYAA VIAEYVDPAR SGTSGIDLLR LIAAKLNDGL DPAKSWDAGS RAKAWSDFNA
4261 LAVDRQHSLV DQALSGYFGT GARADYVAFI NNYIAPTAPD VGFDFLAEVA GVLGISKDAA
4321 SARFATIAAG QDTPTLREKL AINRSFNDFL IRVGKDRNDP GSIYSGEYGR AYAAISTLFP
4381 AALGYTDNRP GNGVNGAANR IVTGTISLGG SVLETQMGSD ISILMPGGNI NVGRNGQDLL
4441 SPIQEGILTL AGGTIRGYSD GTIQLAQSRV MTMQGGDIDL FSANGDINAG QGSKTYAASP
4501 PQQTICDANG YCYLNPTGLV TGAGIAALIT LKGQDPSKSD VNLYAPTGTI DAGSAGIRVA
4561 GNLSLGAAHI LNAFNINVQG SATGLPTVAP PPVAALTLGN NTAAAPQKLA PSQQPSADGR
4621 ASVIIVEVLG YGGGQGGGGD TPARNGTSQS GGNGNGATAP QSASGSEACK EGAADCRSRP
//