LOCUS BAL93665.1 1373 aa PRT BCT 07-OCT-2016
DEFINITION Rubrivivax gelatinosus IL144 DNA-directed RNA polymerase
subunit beta RpoB protein.
ACCESSION AP012320-320
PROTEIN_ID BAL93665.1
SOURCE Rubrivivax gelatinosus IL144
ORGANISM Rubrivivax gelatinosus IL144
Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
Sphaerotilaceae; Rubrivivax.
REFERENCE 1 (bases 1 to 5043253)
AUTHORS Sekine,M., Nagashima,S., Kamimura,A., Shimizu,T., Nakamura,S.,
Aono,E., Sakamoto,K., Nakazawa,H., Yamazaki,S., Nagashima,K. and
Fujita,N.
TITLE Direct Submission
JOURNAL Submitted (16-FEB-2012) to the DDBJ/EMBL/GenBank databases.
Contact:Director-General Department of Biotechnology
National Institute of Technology and Evaluation, NITE Biological
Resource Center; 2-49-10 Nishihara, Shibuya-ku, Tokyo 151-0066,
Japan
URL :http://www.bio.nite.go.jp/
REFERENCE 2
AUTHORS Nagashima,S., Kamimura,A., Shimizu,T., Nakamura-isaki,S., Aono,E.,
Sakamoto,K., Ichikawa,N., Nakazawa,H., Sekine,M., Yamazaki,S.,
Fujita,N., Shimada,K., Hanada,S. and Nagashima,K.V.P.
TITLE Complete Genome Sequence of Phototrophic Betaproteobacterium
Rubrivivax gelatinosus IL144
JOURNAL J. Bacteriol. 194, 3541-3542 (2012)
COMMENT ##Genome-Assembly-Data-START##
Assembly Method :: phrap v. 0.020425.c
Genome Coverage :: 8.0x
Sequencing Technology :: Sanger ABI3730
##Genome-Assembly-Data-END##
Please visit our web site.
URL:http://www.bio.nite.go.jp/
DOGAN ; Database of Genomes Analyzed at NITE
The database contains genome sequence data, physical maps
and the genomic and proteomic data of the microorganisms
analyzed.
URL:http://www.bio.nite.go.jp/dogan/Top
FEATURES Qualifiers
source /culture_collection="NBRC:100245"
/db_xref="taxon:983917"
/mol_type="genomic DNA"
/note="strain coidentity: NBRC 100245"
/organism="Rubrivivax gelatinosus IL144"
/strain="IL144"
protein /EC_number="2.7.7.6"
/gene="rpoB"
/locus_tag="RGE_03200"
/transl_table=11
BEGIN
1 MAQATPYTFT ERKRIRKSFG KRENVLKVPY LLTMQSDSYV AFLQKDVPPQ QRKPEGLQAA
61 FLSAFPIVSH NGFVEMKFLE YNIAKPPFDV RECQQRGLTF AAAVRAKLQM IIYDRESHPA
121 KVVKEIKEQE VYMGEVPLMT DYGSFIVNGT ERVIVSQLHR SPGVFFEHDK GKTHSSGKLL
181 FSARIIPYRG SWLDFEFDPK DILYFRVDRR RKMPVTILLK AIGLNPEQIL SHFFVFDNFR
241 LMDSGAQMEF VPERLKGEIA RFDLTDKNGA VIVEKDKRIT ARHVRQLEQT GTTFVSVPED
301 FLVGRVIARN MVDPDTGEIV AKANDEITET LLKKLRSAGI KDIQCLFTNE LNQGAYISQP
361 LASDETADQL AARVAIYRMM RPGEPPTEDA VEALFHRLFY SEDTYDLSRV GRMKFNARVG
421 RDTPDGKMTL SNEDILDVVK ILVDLRNGNG EVDDIDHLGN RRVRCVGELA ENQYRSGLAR
481 IEKAVKERLG QAETEALMPH DLINSKPISA ALKEFFGASQ LSQFMDQTNP LSEITHKRRV
541 SALGPGGLTR ERAGFEVRDV HPTHYGRVCP IETPEGPNIG LINSLALYAQ LNEYGFLETP
601 YRRVVDGKVT DQIDYLSAIE EGKYVIAQAN ATLDGEGRLI DELVSARENG ESVLLSPERV
661 QYMDVAPTQI VSVAASLVPF LEHDDANRAL MGANMQRQAV PTLRPEKALV GTGVERVAAV
721 DSGTVVTARR GGIVDYVDTN RIVIRVNDDE TVAGEVGVDI YNLIKYQRSN QNTNIHQRPI
781 VRRGDHVGAG DVVADGASTD LGELALGQNM LVAFMPWNGY NFEDSILISE RVVAEDRYTS
841 IHIEELVVMA RDTKLGSEEI TRDIPNLSEQ QLARLDESGI VYIGAEVNPG DVLVGKVTPK
901 GETTLTPEEK LLRAIFGEKA SDVKDTSLRV DQGTSGTVID VQVFTREGIQ RDKRAQQIID
961 DELKRFRLDL NDQLRIVEAD AFDRIEKLLA GRVANGGPQK IAKGTTITKE YLATVEKYHW
1021 FDIRPAEDEV ANQLESIKNS LEQTRHSFDL AFEEKRKKLT QGDELPAGVL KMVKVYLAVK
1081 RRLQPGDKMA GRHGNKGVVS KIVAIEDMPY MADGTPCDIV LNPLGVPSRM NVGQVLEVHL
1141 GWAGKGIGQR IGDMLQQQAR AAELRELFDE LYNKSGGKTE SLQDLSDDEI VEMAKNLQHG
1201 VPFATPVFDG AEEQEIRAML KLAYPDELAA RKGLTATRTQ ATLHDGRTGE AFERPVTVGY
1261 MHVLKLHHLV DDKMHARSTG PCSLVTQQPL GGKAQFGGQR FGEMEVWALE AYGASYILQE
1321 MLTVKSDDVN GRTKVYENIV KGEHSIEAGM PESFNVLVKE IRSLGIDIEL ERD
//