LOCUS BAL40733.1 813 aa PRT BCT 04-JUN-2019 DEFINITION Escherichia coli str. K-12 substr. MDS42 exoribonuclease R, RNase R protein. ACCESSION AP012306-3413 PROTEIN_ID BAL40733.1 SOURCE Escherichia coli str. K-12 substr. MDS42 ORGANISM Escherichia coli str. K-12 substr. MDS42 Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia. REFERENCE 1 (bases 1 to 3976195) AUTHORS Ying,B.W., Seno,S., Suzuki,S. and Yomo,T. TITLE Direct Submission JOURNAL Submitted (30-NOV-2011) to the DDBJ/EMBL/GenBank databases. Contact:Shigeto Seno Osaka University, Graduate School of Information Science and Technology; Yamadaoka 1-5, Suita, Osaka 565-0871, Japan REFERENCE 2 AUTHORS Fredens,J., Wang,K., de la Torre,D., Funke,L.F.H., Robertson,W.E., Christova,Y., Chia,T., Schmied,W.H., Dunkelmann,D.L., Beranek,V., Uttamapinant,C., Llamazares,A.G., Elliott,T.S. and Chin,J.W. TITLE Total synthesis of Escherichia coli with a recoded genome JOURNAL Nature 569, 514-518 (2019) REMARK DOI:10.1038/s41586-019-1192-5 COMMENT MDS42 is a genome reduced strain constructed from MG1655 by Posfai et al (originally reported in Science 2006), and is commercially available from Scarab Genomics (the founder is Dr. Frederick R. Blattner). We re-confirmed the whole genome sequence of MDS42 by the next generation resequencing technology based on SOLiD3 (Applied Biosystems) ##Genome-Assembly-Data-START## Assembly Method :: Bioscope v. 1.3 Genome Coverage :: 300x Sequencing Technology :: SOLiD 3 ##Genome-Assembly-Data-END## FEATURES Qualifiers source /db_xref="taxon:1110693" /mol_type="genomic DNA" /organism="Escherichia coli str. K-12 substr. MDS42" /strain="K-12" /sub_strain="MDS42" protein /gene="rnr" /gene_synonym="ECK4175" /gene_synonym="JW5741" /gene_synonym="b4179" /locus_tag="ECMDS42_3621" /transl_table=11 BEGIN 1 MSQDPFQERE AEKYANPIPS REFILEHLTK REKPASRDEL AVELHIEGEE QLEGLRRRLR 61 AMERDGQLVF TRRQCYALPE RLDLVKGTVI GHRDGYGFLR VEGRKDDLYL SSEQMKTCIH 121 GDQVLAQPLG ADRKGRREAR IVRVLVPKTS QIVGRYFTEA GVGFVVPDDS RLSFDILIPP 181 DQIMGARMGF VVVVELTQRP TRRTKAVGKI VEVLGDNMGT GMAVDIALRT HEIPYIWPQA 241 VEQQVAGLKE EVPEEAKAGR VDLRDLPLVT IDGEDARDFD DAVYCEKKRG GGWRLWVAIA 301 DVSYYVRPST PLDREARNRG TSVYFPSQVI PMLPEVLSNG LCSLNPQVDR LCMVCEMTVS 361 SKGRLTGYKF YEAVMSSHAR LTYTKVWHIL QGDQDLREQY APLVKHLEEL HNLYKVLDKA 421 REERGGISFE SEEAKFIFNA ERRIERIEQT QRNDAHKLIE ECMILANISA ARFVEKAKEP 481 ALFRIHDKPS TEAITSFRSV LAELGLELPG GNKPEPRDYA ELLESVADRP DAEMLQTMLL 541 RSMKQAIYDP ENRGHFGLAL QSYAHFTSPI RRYPDLTLHR AIKYLLAKEQ GHQGNTTETG 601 GYHYSMEEML QLGQHCSMAE RRADEATRDV ADWLKCDFML DQVGNVFKGV ISSVTGFGFF 661 VRLDDLFIDG LVHVSSLDND YYRFDQVGQR LMGESSGQTY RLGDRVEVRV EAVNMDERKI 721 DFSLISSERA PRNVGKTARE KAKKGDAGKK GGKRRQVGKK VNFEPDSAFR GEKKTKPKAA 781 KKDARKAKKP SAKTQKIAAA TKAKRAAKKK VAE //