LOCUS       BAK64891.1               784 aa    PRT              BCT 07-OCT-2016
DEFINITION  Sphingobium sp. SYK-6 ribonuclease R protein.
ACCESSION   AP012222-216
PROTEIN_ID  BAK64891.1
SOURCE      Sphingobium sp. SYK-6
  ORGANISM  Sphingobium sp. SYK-6
            Bacteria; Pseudomonadota; Alphaproteobacteria; Sphingomonadales;
            Sphingomonadaceae; Sphingobium.
REFERENCE   1  (bases 1 to 4199332)
  AUTHORS   Oguchi,A., Ankai,A., Fukui,S., Takahashi,M., Yashiro,I., Kato,Y.,
            Sasaki,K., Sekiguchi,M., Harada,T., Nakamura,S., Katano,Y.,
            Yamada,S., Nakazawa,H., Kamimura,N., Kasai,D., Fukuda,M.,
            Masai,E., Yamazaki,S. and Fujita,N.
  TITLE     Direct Submission
  JOURNAL   Submitted (28-JUN-2011) to the DDBJ/EMBL/GenBank databases.
            Contact:Director-General Department of Biotechnology
            National Institute of Technology and Evaluation, Biological
            Resource Center; 2-49-10 Nishihara, Shibuya-ku, Tokyo 151-0066,
            Japan
            URL    :http://www.bio.nite.go.jp/
REFERENCE   2
  AUTHORS   Masai,E., Kamimura,N., Kasai,D., Oguchi,A., Ankai,A., Fukui,S.,
            Takahashi,M., Yashiro,I., Sasaki,H., Harada,T., Nakamura,S.,
            Katano,Y., Narita-Yamada,S., Nakazawa,H., Hara,H., Katayama,Y.,
            Fukuda,M., Yamazaki,S. and Fujita,N.
  TITLE     Complete Genome Sequence of Sphingobium sp. Strain SYK-6, a
            Degrader of Lignin-Derived Biaryls and Monoaryls
  JOURNAL   J. Bacteriol. 194, 534-535 (2012)
COMMENT     ##Genome-Assembly-Data-START##
            Assembly Method       :: phred/phrap v. 0.020425.c
            Genome Coverage       :: 8.0x
            Sequencing Technology :: Sanger ABI3730
            ##Genome-Assembly-Data-END##
            
            Please visit our web site.
            URL:http://www.bio.nite.go.jp/
            
            DOGAN ; Database of Genomes Analyzed at NITE
            The database contains genome sequence data, physical maps
            and the genomic and proteomic data of the microorganisms
            analyzed.
            URL:http://www.bio.nite.go.jp/dogan/Top
            
            Kamimura, N., Kasai, D., Fukuda, M., Masai, E. are at Department
            of Bioengineering, Nagaoka University of Technology.
FEATURES             Qualifiers
     source          /db_xref="NBRC:103272"
                     /db_xref="taxon:627192"
                     /mol_type="genomic DNA"
                     /note="strain coidentity: NBRC 103272"
                     /organism="Sphingobium sp. SYK-6"
                     /strain="SYK-6"
     protein         /EC_number="3.1.-.-"
                     /gene="rnr"
                     /locus_tag="SLG_02160"
                     /note="protein synonym:RNase R"
                     /transl_table=11
BEGIN
        1 MASPQKPRPA GFPSRQQILD FIASSDQPAG KREIARAFGL KGSEKIALKA LLKDMADEGL
       61 IDIGPARAFH QMGGVPKVTV LRVIDTEGAQ VIAVPERWEA EGHPIPKLRV IERGKRGALG
      121 VGDRILARTE QAGHGWVAHP MKKLAGAAEQ MLGVVAKDER GKLVLRPVDK RIRRETPISE
      181 HGEAVPGDLV LAEKTGRPPR ITARVTDVLG DPFQPRAFSL IAIHKYGIPD AFPEEAEEEA
      241 AKVHDLPLHA EAREDLRALP IVAIDPVDAR DFDDAVWATP DDDPANEGGY KAIVAIADVS
      301 YYVRPGSQLD RQARKRGNSV YFPDRVVPML PHALSSDMCS LRAEQDRAAM ACHLVIDRHG
      361 KMQSWRFTRA LIRVAANIPY EQAQAAMDKA EGKGRPDAPA SFAWNEGPED LVEVALKPLW
      421 ACWRLLARDR KARGPLDLDL PERRVVLDEE GRIVSIAVRE RLDAHRLIED YMVTANVAAA
      481 KALEAKKAPV MYRVHEPPTR EKLASLKDYL DTFDIPLTLG QVITTKTFNR IIERIPDDAA
      541 ARPQIMEQIL RSQTQAYYGP QRLGHFGLAL GSYAHFTSPI RRYADLLVHR ALVGAYGLEL
      601 PAPKDRGIAR ETRLSAEDAA DLTPIGERIS QFERRAMEAE RETVDRYVAA FLASHVGEIM
      661 ACRITGVQSF GFFATVKELG GDGLVPVSTL GHERFRYDEV HQALEGEETG ERYALGDHID
      721 LRLVESDPIN GALRFELPEG ASHMPAGRDR RSGRPPGGPR TIRRQGRPAN IRHTSSKRGP
      781 VKRR
//