LOCUS BAK64891.1 784 aa PRT BCT 07-OCT-2016 DEFINITION Sphingobium sp. SYK-6 ribonuclease R protein. ACCESSION AP012222-216 PROTEIN_ID BAK64891.1 SOURCE Sphingobium sp. SYK-6 ORGANISM Sphingobium sp. SYK-6 Bacteria; Pseudomonadota; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium. REFERENCE 1 (bases 1 to 4199332) AUTHORS Oguchi,A., Ankai,A., Fukui,S., Takahashi,M., Yashiro,I., Kato,Y., Sasaki,K., Sekiguchi,M., Harada,T., Nakamura,S., Katano,Y., Yamada,S., Nakazawa,H., Kamimura,N., Kasai,D., Fukuda,M., Masai,E., Yamazaki,S. and Fujita,N. TITLE Direct Submission JOURNAL Submitted (28-JUN-2011) to the DDBJ/EMBL/GenBank databases. Contact:Director-General Department of Biotechnology National Institute of Technology and Evaluation, Biological Resource Center; 2-49-10 Nishihara, Shibuya-ku, Tokyo 151-0066, Japan URL :http://www.bio.nite.go.jp/ REFERENCE 2 AUTHORS Masai,E., Kamimura,N., Kasai,D., Oguchi,A., Ankai,A., Fukui,S., Takahashi,M., Yashiro,I., Sasaki,H., Harada,T., Nakamura,S., Katano,Y., Narita-Yamada,S., Nakazawa,H., Hara,H., Katayama,Y., Fukuda,M., Yamazaki,S. and Fujita,N. TITLE Complete Genome Sequence of Sphingobium sp. Strain SYK-6, a Degrader of Lignin-Derived Biaryls and Monoaryls JOURNAL J. Bacteriol. 194, 534-535 (2012) COMMENT ##Genome-Assembly-Data-START## Assembly Method :: phred/phrap v. 0.020425.c Genome Coverage :: 8.0x Sequencing Technology :: Sanger ABI3730 ##Genome-Assembly-Data-END## Please visit our web site. URL:http://www.bio.nite.go.jp/ DOGAN ; Database of Genomes Analyzed at NITE The database contains genome sequence data, physical maps and the genomic and proteomic data of the microorganisms analyzed. URL:http://www.bio.nite.go.jp/dogan/Top Kamimura, N., Kasai, D., Fukuda, M., Masai, E. are at Department of Bioengineering, Nagaoka University of Technology. FEATURES Qualifiers source /db_xref="NBRC:103272" /db_xref="taxon:627192" /mol_type="genomic DNA" /note="strain coidentity: NBRC 103272" /organism="Sphingobium sp. SYK-6" /strain="SYK-6" protein /EC_number="3.1.-.-" /gene="rnr" /locus_tag="SLG_02160" /note="protein synonym:RNase R" /transl_table=11 BEGIN 1 MASPQKPRPA GFPSRQQILD FIASSDQPAG KREIARAFGL KGSEKIALKA LLKDMADEGL 61 IDIGPARAFH QMGGVPKVTV LRVIDTEGAQ VIAVPERWEA EGHPIPKLRV IERGKRGALG 121 VGDRILARTE QAGHGWVAHP MKKLAGAAEQ MLGVVAKDER GKLVLRPVDK RIRRETPISE 181 HGEAVPGDLV LAEKTGRPPR ITARVTDVLG DPFQPRAFSL IAIHKYGIPD AFPEEAEEEA 241 AKVHDLPLHA EAREDLRALP IVAIDPVDAR DFDDAVWATP DDDPANEGGY KAIVAIADVS 301 YYVRPGSQLD RQARKRGNSV YFPDRVVPML PHALSSDMCS LRAEQDRAAM ACHLVIDRHG 361 KMQSWRFTRA LIRVAANIPY EQAQAAMDKA EGKGRPDAPA SFAWNEGPED LVEVALKPLW 421 ACWRLLARDR KARGPLDLDL PERRVVLDEE GRIVSIAVRE RLDAHRLIED YMVTANVAAA 481 KALEAKKAPV MYRVHEPPTR EKLASLKDYL DTFDIPLTLG QVITTKTFNR IIERIPDDAA 541 ARPQIMEQIL RSQTQAYYGP QRLGHFGLAL GSYAHFTSPI RRYADLLVHR ALVGAYGLEL 601 PAPKDRGIAR ETRLSAEDAA DLTPIGERIS QFERRAMEAE RETVDRYVAA FLASHVGEIM 661 ACRITGVQSF GFFATVKELG GDGLVPVSTL GHERFRYDEV HQALEGEETG ERYALGDHID 721 LRLVESDPIN GALRFELPEG ASHMPAGRDR RSGRPPGGPR TIRRQGRPAN IRHTSSKRGP 781 VKRR //