LOCUS BAI98014.1 4159 aa PRT BCT 07-OCT-2016
DEFINITION Sphingobium indicum UT26S putative Ca2+-binding hemolysin protein.
ACCESSION AP010803-3180
PROTEIN_ID BAI98014.1
SOURCE Sphingobium japonicum UT26S
ORGANISM Sphingobium indicum UT26S
Bacteria; Pseudomonadota; Alphaproteobacteria; Sphingomonadales;
Sphingomonadaceae; Sphingobium.
REFERENCE 1 (bases 1 to 3514822)
AUTHORS Nagata,Y., Ohtsubo,Y., Oguchi,A., Ankai,A., Yashiro,I., Fukui,S.,
Kamata,S., Takahashi,M., Ichikawa,N., Tanikawa,S., Tsuda,M. and
Fujita,N.
TITLE Direct Submission
JOURNAL Submitted (04-JUL-2008) to the DDBJ/EMBL/GenBank databases.
Contact:Director-General Department of Biotechnology
National Institute of Technology and Evaluation, NITE Genome
Analysis Center (NGAC), Department of Biotechnology; 2-49-10
Nishihara, Shibuya-ku, Tokyo 151-0066, Japan
URL :http://www.bio.nite.go.jp/
REFERENCE 2
AUTHORS Nagata,Y., Ohtsubo,Y., Endo,R., Ichikawa,N., Ankai,A., Oguchi,A.,
Fukui,S., Fujita,N. and Tsuda,M.
TITLE Complete Genome Sequence of the Representative
gamma-Hexachlorocyclohexane-Degrading Bacterium Sphingobium
japonicum UT26
JOURNAL J. Bacteriol. 192, 5852-5853 (2010)
COMMENT "Nagata, Y., Ohtsubo, Y. and Tsuda, M. are at Department of
Environmental Life Sciences Graduate School of Life Science,
Tohoku University. The other authors are at NITE Genome Analysis
Center (NGAC).
Please visit our web site. URL:http://www.bio.nite.go.jp/
DOGAN ; Database of Genomes Analyzed at NITE. The database
contains genome sequence data, physical maps and the genomic and
proteomic data of the microorganisms analyzed.
URL:http://www.bio.nite.go.jp/dogan/Top
The microbial strain and microbial genomic DNA clones used for the
sequencing project are available through the NBRC.
URL:http://www.nbrc.nite.go.jp/e/index.html
FEATURES Qualifiers
source /chromosome="1"
/culture_collection="NBRC:101211"
/db_xref="NBRC:101211"
/db_xref="taxon:452662"
/mol_type="genomic DNA"
/note="strain coidentity: NBRC 101211"
/organism="Sphingobium japonicum UT26S"
/strain="UT26S"
protein /locus_tag="SJA_C1-31800"
/note="RTX toxin or related Ca2+-binding protein"
/transl_table=11
BEGIN
1 MASIGGELLN GDDVEAGSYG MRKKAFVYWN DGTSSDNRIK FSTASDLVEY GVMKAAQQME
61 IIGGDIYSKR AFYLTMARGA VTSSNGDGAT ADDGKSSNNV DFGLDLLLGN FAVADRLKVY
121 LANSASINAL IAAEPDSVFT TDWLIALASA SELGLLKRNE HDWDGGFSYL LDRGNVDARN
181 VGFRFETSSR EGNGERVMYL DGAALEDTID TGSKTIVQGG ASDDVLTAYA GGARDGAAAG
241 TAYHIANVFH GGDGDDRIVA DDTGDDLFGD GGNDLLVGGK LDDWLFGGAG DDVLDAGGGS
301 GNVLIAGEGN DRLVGSNGVS ADPMDSGSDW LLGGLGNDRL YGLGGDDYFE GGQGSDFIEG
361 GKGSDTIIFR AGDGTDRISD IGTDEGDIDV IQFGDGIAPT DVGVVASSSS IDMSMLLGAG
421 GDRIDLRGAA LTSRAGIEFF DFGSTIWSRG QITAQAIFAK NAGSIISGSG TAESVDGTRY
481 DDALSGGAGD TLRGGYGSDS YRFALGDGVV TIDERSFASD LDIVTFASSI ALADITVTVD
541 PDASQDLIVH VGSAGDRLIL KNQDIDSGVN SIEELRFADG TSLTLGDLYQ MVLGGAFTAG
601 ADVKTGLDQS DRFASGNGDD TLIGGKGNDN LIGGFGLDTY VWNLGDGHDR IEDSNFTEYF
661 YPAWAGTNTL RFGAGISASD VILSRDPADR NNLRVTFTND TGSILIDDQF IATRYGDYGW
721 GIETFVFDDG TVWDRATIMN QLQPGSLTSL SDTFYGNHFG ETVAAGAGDD HIATGNGDDT
781 LAGGLGNDNL IGGFGSDTYV WNLGDGHDRI EDSNFTEYFY PAWAGTNTLR FGAGISASDV
841 ILSRDPADRN NLRVTFTNDT GSILIDDQFI ATRYGDYGWG IETFVFDDGT VWDRATIMNQ
901 LQPGSLTSLS DTFYGNHFGE TVAAGAGDDH IATGNGDDTL AGGLGNDNLI GGFGSDTYVW
961 NLGDGHDRIE DSNFTEYFYP AWAGTNTLRF GAGISASDVI LSRDPADRNN LRVTFTNDTG
1021 SILIDDQFIA TRYGDYGWGI ETFVFDDGTV WDRATIMNQL QPGSLTSLSD RFDGIQFDEV
1081 VESGAGNDYI TTNNGNDTLM GGTGDDNLIG GFGSDTYVWN LGDGHDRIED SNYSETFYPA
1141 WVGTNTLRFG AGISASDVIL SRDPADRNNL RVTFTNDTGS ILIDDQFIGT RYGDYGWGIE
1201 IFVFDDGTVW DRATINSQVV VVTLNNIQGT ASNNTLLGMG GDDEISGLDG NDTLDGGAGN
1261 DRLDGGNGDD ILSGGLGDDW LSGGAGNDTY LFNLGDGWDV LQDSSGTDTV RFAAGISAGD
1321 IRLSQVRQDG DVDGIMLSIA GTTNRLHLVG QNGANRIERF EFADGTVWTD ADLRQHLYSQ
1381 VLTAGDDIVR GTAFNDTLSG MGGDDEIAGV DGNDTLDGGA GNDRLDGGNG DDQLSGGSGD
1441 DWLSGGAGND TYLFNLGDGW DVLQDSSGTD TVRFAAGISA GDIRLSQVRQ DGDVDGIMLS
1501 IAGTTNRLHL VGQNGANRIE RFEFADGTVW TDADLRQHLY SQVLTAGDDI VRGTAFNDTL
1561 SGMGGDDEIA GVDGNDTLDG GAGNDRLDGG NGDDQLSGGS GDDWLSGGAG NDTYLFNLGD
1621 GWDVLQDSSG TDTVRFAAGI SAGDIRLSQV RQDGDVDGIM LSIAGTTNRL HLVGQNGANR
1681 IERFEFADGT VWTDADLRQH LYSQVLTAGD DIVRGTAFND TLSGMGGDDE IAGLDGNDTL
1741 DGGKGSDRLE GGNGNDIYIF NRGDGRDAIW DSGGSDTVRF GAGIAPGDLE FTQAQQDGDS
1801 NGLTLAIKGT ADQLYIIGQA GGSLIERFEF FDGSVWTPQM LTDLRTSNNI GGQQVAVTMG
1861 DDTIVGTSGT DTIRGMGGDD ALRGGMGADT YRFARGDGFD TIYDPDEAAA TDVLILDGIN
1921 SGDVAVMFSP TDTDDIILYI DDQSIVYLDQ NRVGGKTGID EIRFADGAIW DRATLLAKAS
1981 GGQGTVGNDL LIGSNFADTL TGGTGDDRLV GGAGNDIYVY NAGDGNDVIV DSADSADSAA
2041 ATGNVLSFGP GITLADIRLT RNAVDGPLII SFAGQVGSVT LEGSDVDGLA GVQFLKFADG
2101 SVHSMADVRQ AALTGQATSG NDLIEGFATA DTLTGGAGND TLIGRGGADT YHFALGYGED
2161 TIIESDGAAN KLVFGAGIAT ASLRLYRTID APDDLIIALP NGTDRVVLKD QLSSSGRSGV
2221 AKISFANGTV WDRDKIIEQL LSQPATPYAD YLVGSDSADS IDGLAGNDFI EGGKGNDILA
2281 GSDGNDILFG GIGNDVLYGG EGDDILSGDQ GVDTLDGGNG FDTADYSFSL DSWNIDLAAG
2341 TASIIQSTGT APTETLISIE SVVGGLGSDR IKGSDVANRI RGGAGNDILE GRGGDDVFIV
2401 EGDEEGIDTI DGGEGYDRIE AAADDTIIGL SSLANVELIA ANGHANVRIE GTDENDVLDL
2461 SAAELSGIVS IDLGAGNDIL TGTLGADTIN AGAGDDIIRY VGQGAGADVV DGGEGVDRIE
2521 AAADNAIIRL ASYQNIEAIS GGQFTGVVLV RTDAAETTNL SGLSVSGLSR IDLEGGDDIF
2581 IGTNQAETVR GGQGNDTLSG NGGDDIFDYV GTANGIDSIS GGDGFDTVRA SADNTRIVLS
2641 SLTSVERLTG NGYANVVVEW GASNDILNFS AVVLDGLTLE TGGGNDSVTL TGGGIVLVGG
2701 TGNDTFTVSG NGGHTFKFGA GDGNDTLTNP GSGYARNDIL QLVGLNADEV SLTRSGDQLK
2761 VAITATGEVF NVAYQFWGEA QGAQYGLGSI AFADGTVWDR ARIQREARIR GTAAGERIDG
2821 TSAPNTIQGN GGDDFLLGAG GDDIYLYASG DGNDHIVDYN NGVADSDTLK LIDLNPGDVE
2881 LRRSGDQLYV KNLTTGQEIW VEIQFHSSTR YAIENIQFAD GTIWDLARIQ QEAWYRGTVG
2941 AETIDGSGAA DTIVGKQEND FLRGGQGNDT YVYASGDGND HIVDYNGGVA DSDTLKLVNL
3001 NPGDVELRRW GDQLYIKDLT TGQEIWVEIQ FHSSGSYAVE NIQFADGTVW NLARIQQEAW
3061 IRGTAGAETI DGSGAADTIV GKQGDDFLRG GQGNDTYVYA SGDGNDHIVD YNGGVTDSDT
3121 LKLVNLNPGD VELRRSGDQL YVKDLTTGQQ IWVEIQFHSS GSYAVENIQF ADGTVWNLAR
3181 IKQEAWYRGT SAGERIDGNS EGNTLLGKEG NDHLVGGAGS DTYVYQSGDG SDRIEDSPST
3241 TTDVDRLVLL DLNPDDVTFS RVTSTGYMKV NATGEVLTID YQFWNELVES RGLEEIQFAD
3301 GTIWNRSQIL AAGWFRGGDG NDSLSGYATA NTFEGGKGDD YLVGAAGDDT YVYRSGDGSD
3361 HIWDYNAGAS DTDTLKLVDL NPSDVELRRS GDHLYVKDLT TGQEIWIEYH FYSDSRDVVE
3421 RIQFADGTVW DRSNIAAFVA TAGNDTITGN SGANILRGFA GDDGIVGLAG DDTVYGDDGN
3481 DLLYGDGLGS TGPNLIVNGS FEEQGTNPSY QSWGVWLDAI PGWIKSNPGR YNQTSSGFSG
3541 IPSTEGQYYL DLDDAGQVGG NMDIRQMIGG LTAGETMLLS FDHANSRQSA SGFFNVYWNG
3601 QKVASITDTS LQMQTENILV TAIAGDNELR FQGTGAEDGL GAALDNIRMS TAAQTISNDM
3661 LYGGAGTDYL DGGAGDDQLD GGDDNDMLFG DGLLPIGTNL IVNGSFESLG PNPSYQGWGV
3721 WSDAMPGWTK TNVGRFNQVY SGNDGSYATD GQFLLDLDDA GQAGSNMDVR QTIGGLTAGQ
3781 ALALTFDHGN PRNSDSGFFE VYWNDQLLAT ITDLGGQMRS TELHVIAADG DNVLRFQGIG
3841 AGDAVGGQID NVQLFATQSA GTGSDILTGG AGNDWLDGGA GADMAVFSGA MADYTVVTTN
3901 GTVTIVDSQP LLDGNDGTDT LVGIETVSFR DGSLNLAAPI VLDLNGNGVS LVDNRNTKVS
3961 FDWDGDGQRD QTGWIGKDDG LLFIDRDGNG TVTNGGELSF TSDKEGAKSD LDGLRAFDSD
4021 GDGILSSADD QFDRFKVWRD KNGNGQVDKK EILSLQKAGV ASIDLTGEAV NQNWEWGENI
4081 TVNTGSFTRT NGTVGSFSDV ALSYDTSTPQ NAAINKAASQ LSEAMAGFWD GRGTAAFGKF
4141 EALAERRDNF LAAARGGWR
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