LOCUS BAH94915.1 315 aa PRT CON 11-AUG-2012
DEFINITION Oryza sativa Japonica Group Os10g0455900 protein.
ACCESSION AP008216-823
PROTEIN_ID BAH94915.1
SOURCE Oryza sativa Japonica Group (Japanese rice)
ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP
clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
REFERENCE 1 (bases 1 to 23661561)
AUTHORS Sasaki,T.
TITLE Direct Submission
JOURNAL Submitted (25-OCT-2004) to the DDBJ/EMBL/GenBank databases.
Contact:Takuji Sasaki
National Institute of Agrobiological Sciences, Rice Genome
Research Program; Kannondai 2-1-2, Tsukuba, Ibaraki 305-8602, Japan
URL :http://rgp.dna.affrc.go.jp/
REFERENCE 2
AUTHORS
CONSRTM IRGSP(International Rice Genome Sequencing Project)
TITLE Oryza sativa nipponbare(GA3) genomic DNA, chromosome 10
JOURNAL Unpublished (2004)
REFERENCE 3
AUTHORS Matsumoto,T., Wu,J., Kanamori,H., Katayose,Y., Fujisawa,M.,
Namiki,N., Mizuno,H., Yamamoto,K., Antonio,B.A., Baba,T.,
Sakata,K., Nagamura,Y., Aoki,H., Arikawa,K., Arita,K., Bito,T.,
Chiden,Y., Fujitsuka,N., Fukunaka,R., Hamada,M., Harada,C.,
Hayashi,A., Hijishita,S., Honda,M., Hosokawa,S., Ichikawa,Y.,
Idonuma,A., Iijima,M., Ikeda,M., Ikeno,M., Ito,K., Ito,S., Ito,T.,
Ito,Y., Ito,Y., Iwabuchi,A., Kamiya,K., Karasawa,W., Kurita,K.,
Katagiri,S., Kikuta,A., Kobayashi,H., Kobayashi,N., Machita,K.,
Maehara,T., Masukawa,M., Mizubayashi,T., Mukai,Y., Nagasaki,H.,
Nagata,Y., Naito,S., Nakashima,M., Nakama,Y., Nakamichi,Y.,
Nakamura,M., Meguro,A., Negishi,M., Ohta,I., Ohta,T., Okamoto,M.,
Ono,N., Saji,S., Sakaguchi,M., Sakai,K., Shibata,M., Shimokawa,T.,
Song,J., Takazaki,Y., Terasawa,K., Tsugane,M., Tsuji,K., Ueda,S.,
Waki,K., Yamagata,H., Yamamoto,M., Yamamoto,S., Yamane,H.,
Yoshiki,S., Yoshihara,R., Yukawa,K., Zhong,H., Yano,M., Yuan,Q.,
Ouyang,S., Liu,J., Jones,K.M., Gansberger,K., Moffat,K., Hill,J.,
Bera,J., Fadrosh,D., Jin,S., Johri,S., Kim,M., Overton,L.,
Reardon,M., Tsitrin,T., Vuong,H., Weaver,B., Ciecko,A., Tallon,L.,
Jackson,J., Pai,G., Aken,S.V., Utterback,T., Reidmuller,S.,
Feldblyum,T., Hsiao,J., Zismann,V., Iobst,S., de Vazeille,A.R.,
Buell,C.R., Ying,K., Li,Y., Lu,T., Huang,Y., Zhao,Q., Feng,Q.,
Zhang,L., Zhu,J., Weng,Q., Mu,J., Lu,Y., Fan,D., Liu,Y., Guan,J.,
Zhang,Y., Yu,S., Liu,X., Zhang,Y., Hong,G., Han,B., Choisne,N.,
Demange,N., Orjeda,G., Samain,S., Cattolico,L., Pelletier,E.,
Couloux,A., Segurens,B., Wincker,P., D'Hont,A., Scarpelli,C.,
Weissenbach,J., Salanoubat,M., Quetier,F., Yu,Y., Kim,H.R.,
Rambo,T., Currie,J., Collura,K., Luo,M., Yang,T., Ammiraju,J.S.S.,
Engler,F., Soderlund,C., Wing,R.A., Palmer,L.E., de la Bastide,M.,
Spiegel,L., Nascimento,L., Zutavern,T., O'Shaughnessy,A., Dike,S.,
Dedhia,N., Preston,R., Balija,V., McCombie,W.R., Chow,T., Chen,H.,
Chung,M., Chen,C., Shaw,J., Wu,H., Hsiao,K., Chao,Y., Chu,M.,
Cheng,C., Hour,A., Lee,P., Lin,S., Lin,Y., Liou,J., Liu,S.,
Hsing,Y., Raghuvanshi,S., Mohanty,A., Bharti,A.K., Gaur,A.,
Gupta,V., Kumar,D., Ravi,V., Vij,S., Kapur,A., Khurana,P.,
Khurana,P., Khurana,J.P., Tyagi,A.K., Gaikwad,K., Singh,A.,
Dalal,V., Srivastava,S., Dixit,A., Pal,A.K., Ghazi,I.A., Yadav,M.,
Pandit,A., Bhargava,A., Sureshbabu,K., Batra,K., Sharma,T.R.,
Mohapatra,T., Singh,N.K., Messing,J., Nelson,A.B., Fuks,G.,
Kavchok,S., Keizer,G., Linton,E., Llaca,V., Song,R., Tanyolac,B.,
Young,S., Ho-Il,K., Hahn,J.H., Sangsakoo,G., Vanavichit,A., de
Mattos,Luiz.A.T., Zimmer,P.D., Malone,G., Dellagostin,O., de
Oliveira,A.C., Bevan,M., Bancroft,I., Minx,P., Cordum,H.,
Wilson,R., Cheng,Z., Jin,W., Jiang,J., Leong,S.A., Iwama,H.,
Gojobori,T., Itoh,T., Niimura,Y., Fujii,Y., Habara,T., Sakai,H.,
Sato,Y., Wilson,G., Kumar,K., McCouch,S., Juretic,N., Hoen,D.,
Wright,S., Bruskiewich,R., Bureau,T., Miyao,A., Hirochika,H.,
Nishikawa,T., Kadowaki,K., Sugiura,M., Burr,B. and Sasaki,T.
CONSRTM International Rice Genome Sequencing Project
TITLE The map-based sequence of the rice genome
JOURNAL Nature 436, 793-800 (2005)
REFERENCE 4
AUTHORS
CONSRTM The Rice Annotation Project (RAP)
TITLE The Second Rice Annotation Project Meeting (RAP2)
JOURNAL Unpublished (2006)
REFERENCE 5
AUTHORS Ohyanagi,H., Tanaka,T., Sakai,H., Shigemoto,Y., Yamaguchi,K.,
Habara,T., Fujii,Y., Antonio,B.A., Nagamura,Y., Imanishi,T.,
Ikeo,K., Itoh,T., Gojobori,T. and Sasaki,T.
TITLE The Rice Annotation Project Database (RAP-DB): hub for Oryza
sativa ssp. japonica genome information
JOURNAL Nucleic Acids Res. 34, D741-D744 (2006)
REFERENCE 6
AUTHORS Itoh,T., Tanaka,T., Barrero,R.A., Yamasaki,C., Fujii,Y.,
Hilton,P.B., Antonio,B.A., Aono,H., Apweiler,R., Bruskiewich,R.,
Bureau,T., Burr,F., Costa de Oliveira,A., Fuks,G., Habara,T.,
Haberer,G., Han,B., Harada,E., Hiraki,A.T., Hirochika,H., Hoen,D.,
Hokari,H., Hosokawa,S., Hsing,Y., Ikawa,H., Ikeo,K., Imanishi,T.,
Ito,Y., Jaiswal,P., Kanno,M., Kawahara,Y., Kawamura,T.,
Kawashima,H., Khurana,J.P., Kikuchi,S., Komatsu,S., Koyanagi,K.O.,
Kubooka,H., Lieberherr,D., Lin,Y.C., Lonsdale,D., Matsumoto,T.,
Matsuya,A., McCombie,W.R., Messing,J., Miyao,A., Mulder,N.,
Nagamura,Y., Nam,J., Namiki,N., Numa,H., Nurimoto,S.,
O'donovan,C., Ohyanagi,H., Okido,T., Oota,S., Osato,N.,
Palmer,L.E., Quetier,F., Raghuvanshi,S., Saichi,N., Sakai,H.,
Sakai,Y., Sakata,K., Sakurai,T., Sato,F., Sato,Y., Schoof,H.,
Seki,M., Shibata,M., Shimizu,Y., Shinozaki,K., Shinso,Y.,
Singh,N.K., Smith-White,B., Takeda,J., Tanino,M., Tatusova,T.,
Thongjuea,S., Todokoro,F., Tsugane,M., Tyagi,A.K., Vanavichit,A.,
Wang,A., Wing,R.A., Yamaguchi,K., Yamamoto,M., Yamamoto,N., Yu,Y.,
Zhang,H., Zhao,Q., Higo,K., Burr,B., Gojobori,T. and Sasaki,T.
CONSRTM The Rice Annotation Project (RAP)
TITLE Curated Genome Annotation of Oryza sativa ssp. japonica and
Comparative Genome Analysis with Arabidopsis thaliana
JOURNAL Genome Res. 17, 175-183 (2007)
REFERENCE 7
AUTHORS Tanaka,T., Antonio,B.A., Kikuchi,S., Matsumoto,T., Nagamura,Y.,
Numa,H., Sakai,H., Wu,J., Itoh,T., Sasaki,T., Aono,R., Fujii,Y.,
Habara,T., Harada,E., Kanno,M., Kawahara,Y., Kawashima,H.,
Kubooka,H., Matsuya,A., Nakaoka,H., Saichi,N., Sanbonmatsu,R.,
Sato,Y., Shinso,Y., Suzuki,M., Takeda,J., Tanino,M., Todokoro,F.,
Yamaguchi,K., Yamamoto,N., Yamasaki,C., Imanishi,T., Okido,T.,
Tada,M., Ikeo,K., Tateno,Y., Gojobori,T., Lin,Y.C., Wei,F.J.,
Hsing,Y.I., Zhao,Q., Han,B., Kramer,M.R., McCombie,R.W.,
Lonsdale,D., O'Donovan,C.C., Whitfield,E.J., Apweiler,R.,
Koyanagi,K.O., Khurana,J.P., Raghuvanshi,S., Singh,N.K.,
Tyagi,A.K., Haberer,G., Fujisawa,M., Hosokawa,S., Ito,Y.,
Ikawa,H., Shibata,M., Yamamoto,M., Bruskiewich,R.M., Hoen,D.R.,
Bureau,TE., Namiki,N., Ohyanagi,H., Sakai,Y., Nobushima,S.,
Sakata,K., Barrero,R.A., Sato,Y., Souvorov,A., Smith-White, B.,
Tatusova,T., An,S., An,G., OOta,S., Fuks,G., Messing,J.,
Christie,K.R., Lieberherr,D., Kim,H., Zuccolo,A., Wing,R.A.,
Nobuta,K., Green,P.J., Lu,C., Meyers,BC., Chaparro,C., Piegu,B.,
Panaud,O. and Echeverria,M.
CONSRTM The Rice Annotation Project (RAP)
TITLE The Rice Annotation Project Database (RAP-DB): 2008 update
JOURNAL Nucleic Acids Res. 36, D1028-D1033 (2008)
COMMENT The IRGSP pseudomolecules (Build 4.0).
The orientation of the sequence is the short arm to the long arm
of the chromosome.
The Institute for Genomic Research Rockville, MD 20850, USA,
URL:http://www.tigr.org/, Tel:(301)838-3558 Fax:(301)838-0208
and
Arizona Genomics Institute, University of Arizona, Tucson, AZ
85721-0036, USA, URL:http://www.genome.arizona.edu/,
Tel:(520)-626-9601 Fax:(520)-621-1259
and
Cold Spring Harbor Laboratory Cold Spring Harbor, NY 11724, USA,
URL:http://www.cshl.org/, Tel:(516)367-8884 Fax:(516)367-8874
and
The Plant Genome Initiative at Rutgers, Waksman Institute, Rutgers
University, Piscataway, NJ 08854, USA,
URL:http://pgir.rutgers.edu/, Tel:732-445-4257 Fax:732-445-5735
The position of gaps in this pseudomolecule with unknown size is
assigned 100 Ns based on the guideline set by DDBJ/EMBL/GenBank.
This sequence entry was annotated by the Rice Annotation Project.
http://rapdb.lab.nig.ac.jp/
FEATURES Qualifiers
source /chromosome="10"
/cultivar="Nipponbare"
/db_xref="taxon:39947"
/mol_type="genomic DNA"
/organism="Oryza sativa Japonica Group"
protein /gene="Os10g0455900"
/note="Pleckstrin homology-type domain containing protein"
/note="contains InterPro domain(s): IPR011993, IPR001849"
/note="supported by AK072120"
/transl_table=1
intron_pos 78:0 (1/11)
intron_pos 96:0 (2/11)
intron_pos 118:0 (3/11)
intron_pos 153:2 (4/11)
intron_pos 178:1 (5/11)
intron_pos 217:0 (6/11)
intron_pos 231:0 (7/11)
intron_pos 264:2 (8/11)
intron_pos 270:2 (9/11)
intron_pos 276:1 (10/11)
intron_pos 298:0 (11/11)
BEGIN
1 MSSSSSSVVY EGWMVRYGRR KIGRSFIHMR YFVLETRLLS YYKRKPQHKM PKLPIKSLHI
61 DGNCRVEDRG LKMHHGHMLY VLCVYNKREK HQRITMAAFN IQEALIWKEK IEMVIDQQQG
121 VVASDGNLAH SSSQQKVSLE NGRKSSFSDH ESLYSHEEEE EEEDNQRSLM RRTTIGNGPP
181 ESLYDWTREN DLGISNQGSP DHVFSRRHWR LVRCQNGLRI FEELQDVDYL ARSCSRAMKA
241 VGVVEASCEA IFQLVMSMDT TRYEWDCSFH WIGSQCLFGL VIFVMYDIGD VMMMGAMLCY
301 FNPESTQTVV HNQDL
//