LOCUS BAH47120.1 654 aa PRT BCT 07-OCT-2016
DEFINITION Rhodococcus opacus B4 putative CdaR family transcriptional
regulator protein.
ACCESSION AP011117-107
PROTEIN_ID BAH47120.1
SOURCE Rhodococcus opacus B4
ORGANISM Rhodococcus opacus B4
Bacteria; Actinomycetota; Actinomycetes; Mycobacteriales;
Nocardiaceae; Rhodococcus.
REFERENCE 1 (bases 1 to 244997)
AUTHORS Sekine,M., Hosoyama,A., Kosugi,H., Yamada,R., Matsuo,Y.,
Tsukatani,N., Fujisawa,T., Takarada,H., Omata,S., Kishi,E.,
Shimizu,A., Koga,C., Saito,S., Nakazawa,H., Sekigawa,T.,
Nishiko,R., Takeyama,M., Tanikawa,S., Tago,S., Fujita,N., Kato,J.,
Na,K.S., Ohtake,H. and Harayama,S.
TITLE Direct Submission
JOURNAL Submitted (30-MAR-2009) to the DDBJ/EMBL/GenBank databases.
Contact:Director-General Department of Biotechnology
National Institute of Technology and Evaluation, NITE Genome
Analysis Center (NGAC), Department of Biotechnology; 2-49-10
Nishihara, Shibuya-ku, Tokyo 151-0066, Japan
URL :http://www.bio.nite.go.jp/
REFERENCE 2
AUTHORS Takarada,H., Sekine,M., Hosoyama,A., Yamada,R., Fujisawa,T.,
Omata,S., Shimizu,A., Tsukatani,N., Tanikawa,S., Fujita,N. and
Harayama,S.
TITLE Comparison of the complete genome sequences of Rhodococcus
erythropolis PR4 and Rhodococcus opacus B4
JOURNAL Unpublished (2009)
REFERENCE 3
AUTHORS Na,K.S., Kuroda,A., Takiguchi,N., Ikeda,T., Ohtake,H. and Kato,J.
TITLE Isolation and characterization of benzene-tolerant Rhodococcus
opacus strains.
JOURNAL J. Biosci. Bioeng. 99, 378-382 (2005)
COMMENT Kato,J., Na,K. and Ohtake,H. are at Department of Molecular
Biotechnology, Hiroshima University.
Rhodococcus opacus B-4 strain was isolated as a benzene-tolerant
bacterium (Kyung-su Na et al 2005). The complete genome analysis
of R. opacus B-4 was carried out by NITE. The genome analysis
indicated that this strain has one linear chromosome, two linear
plasmids pROB01, pROB02, and three circular plasmids pKNR, pKNR01,
pKNR02. Partial nucleotide sequence of the linear plasmid pROB02
was previously determined by Kato et al, and was registered with
the accession number AB193045, which is now merged into this
record with the permission of Dr. Kato.
The differences between the entry AB193045 and this record are as
follows.
'C' at position 169867 was inserted.
'GC' at position 170058-170059 was inserted.
'T' at position 170676 replaced 'C'.
'T' at position 171855 replaced 'G'.
'GCT' at position 173294-173296 replaced 'CTG'.
'A' at position 173783 replaced 'C'.
'AT' at position 173819-173820 was inserted.
'CCT' at position 174725-174727 replaced 'GCC'.
This work was supported by New Energy and Industrial Technology
Development Organization (NEDO).
Please visit our web site.
URL:http://www.bio.nite.go.jp/
DOGAN ; Database of Genomes Analyzed at NITE
The database contains genome sequence data, physical maps and the
genomic and proteomic data of the microorganisms analyzed.
URL:http://www.bio.nite.go.jp/dogan/Top
The microbial genomic DNA clones used for the sequencing project
are available through the NBRC.
URL:http://www.nbrc.nite.go.jp/e/index.html
FEATURES Qualifiers
source /db_xref="taxon:632772"
/mol_type="genomic DNA"
/organism="Rhodococcus opacus B4"
/plasmid="pROB02"
/strain="B4"
protein /locus_tag="ROP_pROB02-01070"
/transl_table=11
BEGIN
1 MSTAAPLPDK CKSAGTAQGS YRADIRACTA FREVAEALAE GRDLDVVLHV IAEKLCLLTG
61 ADRCSIHLVD KETGLLHGRA AHAPTNIDAQ VKQLVSGTMQ DSFTREILST RRPVALSNTL
121 SDPRPIKSAM RRWNAQSVLG VPMVLHDEVI GVVYLDSENT PVEFSAADQE LAVAFADLGA
181 TAIRQTQLTT RLRSSLSTVA TQIEQLRQAA SLEEQLTEIV LRGSSLREIG DTVARLLGKP
241 CAIYDNAFRR RVLSSPAQSA QNFTPKLLDK DIREAPAVRE SLAQLKPGTP TVIQPLPWLG
301 LHHRLLLCAV MLDGDCWGYV VVAEHGRRLS PLDEAVVRRA ALNIALERSG ERRAGTVQWH
361 TIEAFTGSLL RGDESLAALE ERAEVLGLRL DVPRVVCLVA ARQKDAPLQI SPQMLAKRLT
421 DRESPSAVMA APSGNDIALI LELPESADHR RGVAWAKDRV RAAVTGIASE DALNVAISTV
481 AYAPGEDTRA FNEARQVLSC MHHHLGIPGT QFLTVDELGA GRLLLSSTDP TDALRYAHDA
541 LGPLLASDSA KTRELLTTLS VFLDAGWSVR RAARLLGVHA NTIRYRTARI EQLTGLDVAT
601 DAHAQLTAQL ALLILRMNGL LPPTSALPMT DHPTETSDQI EADEADEADD ADVE
//