LOCUS BAH32391.1 1095 aa PRT BCT 07-OCT-2016
DEFINITION Rhodococcus erythropolis PR4 putative AfsR family transcriptional
regulator protein.
ACCESSION AP008957-1683
PROTEIN_ID BAH32391.1
SOURCE Rhodococcus erythropolis PR4
ORGANISM Rhodococcus erythropolis PR4
Bacteria; Actinomycetota; Actinomycetes; Mycobacteriales;
Nocardiaceae; Rhodococcus; Rhodococcus erythropolis group.
REFERENCE 1 (bases 1 to 6516310)
AUTHORS Sekine,M., Tanikawa,S., Omata,S., Saito,M., Fujisawa,T.,
Tsukatani,N., Tajima,T., Sekigawa,T., Kosugi,H., Baba,S.,
Takei,Y., Terui,Y., Matsuo,Y., Nishiko,R., Ito,M., Tago,S.,
Fujita,N. and Harayama,S.
TITLE Direct Submission
JOURNAL Submitted (31-MAR-2005) to the DDBJ/EMBL/GenBank databases.
Contact:Director-General Department of Biotechnology
National Institute of Technology and Evaluation, NITE Genome
Analysis Center (NGAC), Department of Biotechnology; 2-49-10
Nishihara, Shibuya-ku, Tokyo 151-0066, Japan
URL :http://www.bio.nite.go.jp/
REFERENCE 2
AUTHORS Takarada,H., Sekine,M., Hosoyama,A., Yamada,R., Fujisawa,T.,
Omata,S., Shimizu,A., Tsukatani,N., Tanikawa,S., Fujita,N. and
Harayama,S.
TITLE Comparison of the complete genome sequences of Rhodococcus
erythropolis PR4 and Rhodococcus opacus B4
JOURNAL Unpublished (2009)
REFERENCE 3
AUTHORS Sekine,M., Tanikawa,S., Omata,S., Saito,M., Fujisawa,T.,
Tsukatani,N., Tajima,T., Sekigawa,T., Kosugi,H., Matsuo,Y.,
Nishiko,R., Imamura,K., Ito,M., Narita,H., Tago,S., Fujita,N. and
Harayama,S.
TITLE Sequence analysis of three plasmids harboured in Rhodococcus
erythropolis strain PR4
JOURNAL Environ. Microbiol. 8, 334-346 (2006)
COMMENT Rhodococcus erythropolis strain PR4 has been isolated from
the Pacific Ocean. This strain was capable of degrading
normal alkanes as well as branched alkanes as sources of
carbon and energy (Komukai-Nakamura et al., 1996).
This work was supported by NEDO.
Please visit our web site.
URL:http://www.bio.nite.go.jp/
DOGAN ; Database of Genomes Analyzed at NITE
The database contains genome sequence data, physical maps
and the genomic and proteomic data of the microorganisms
analyzed.
URL:http://www.bio.nite.go.jp/dogan/Top
The microbial strain and microbial genomic DNA clones used for
the sequencing project are available through the NBRC.
URL:http://www.nbrc.nite.go.jp/e/index.html
FEATURES Qualifiers
source /db_xref="NBRC:100887"
/db_xref="taxon:234621"
/isolation_source="seawater"
/mol_type="genomic DNA"
/note="This strain is also named as MBIC01337, PR4."
/note="synonym: Rhodococcus erythropolis NBRC 100887"
/organism="Rhodococcus erythropolis PR4"
/strain="PR4 (= NBRC 100887)"
protein /locus_tag="RER_16830"
/transl_table=11
BEGIN
1 MHCAIRSNAV DQHMTRDVSE RARYAQSGED PADIALLGPI STKVGDRLVP LPGPRARTLL
61 VALARNPGEP RTAQSLIDDV WGLEPPRSPM NALHTQVSRL RSALPDGSLE VTAAGYRLTL
121 ARERVDLARA ADAARRLRAG GADASEALAV TTAALRLWRG TPGSDVVGDV ADRLALDAGR
181 VYDELETVQI DALLTLGEYA AAIPLVRGRH LSSPFDDTAA EALMRALAGA GRVNEALEVF
241 AEFRNYLANR LGADPSPALV TLNAELLGAP AATPRAARAI GLRAAPNTLL GRDSDIDQIE
301 SLLARSRVVT ILGPGGAGKT RLAHELGLRG SVNQPGVAVV LVELASLRSS EDVIAAIGGT
361 LGISESDLAP GKLTVGRTHS ARERLKEALS AGPMLLILDN CEHVIGACSE IVAEMIAAGR
421 QLTVLTTSRS PLMISAEAVY PLPPLAIDDG TGSAVELFSA RARAVRPSVH LDVDAVVKLC
481 TTLDGLPLAI ELAAARVRTM SVDEIGSRLR DRFALLRSDD PTSPDRHRTL HAVIDWSWNL
541 LGSGDQIALR RLCRFPAGFT LSSAQAVAGW GELNDVAGAV EALVNQSLLS VSDGQGELRY
601 YMLETVREYG EEQLAASGEG PEVIRRLDVW AIAIAEDAVV RARTDQLRLI ADLDAEHDNL
661 LAVLRWAVER GDAVTVANVF PVLAILWAVR GSNSEVSNWA SKIVGATADN DLRDVNAELV
721 GATFILVAMH LFFAETDRNH ARARVRLRKL LRERDDLGPL FAFLIKLTTS GIANHRLARL
781 VAEGVRSSDP ETRMAALSAR SNMRENIGDL RGALLDGEAL FDYATNAGDE WGLAMAAQHV
841 GSVHSQSARY GEAIEFYAIA AASMERLGAR DEAMQLICFQ AGAMIASGDT AGGRTLLDRA
901 RPALAHSGGT GAIETDQRRA ALMASIAEAD LADGRVEEGL ARYREALELL GSAIENIFGD
961 PFVVLLGAAA VCAHVVHGRH DLVASRVLQM KDSSALKFDP KGYADLPLAG SLASAIGSFD
1021 LVTGNIDRGV ELMALSLKMP GRQDFVSLHH ARLSDFAVGV VGADRWSVET EKVSGYSRRA
1081 VREAVLAALR GPVLD
//