LOCUS BAF30196.2 2895 aa PRT CON 11-AUG-2012
DEFINITION Oryza sativa Japonica Group Os12g0594200 protein.
ACCESSION AP008218-1354
PROTEIN_ID BAF30196.2
SOURCE Oryza sativa Japonica Group (Japanese rice)
ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP
clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
REFERENCE 1 (bases 1 to 27757321)
AUTHORS Sasaki,T.
TITLE Direct Submission
JOURNAL Submitted (25-OCT-2004) to the DDBJ/EMBL/GenBank databases.
Contact:Takuji Sasaki
National Institute of Agrobiological Sciences, Rice Genome
Research Program; Kannondai 2-1-2, Tsukuba, Ibaraki 305-8602, Japan
URL :http://rgp.dna.affrc.go.jp/
REFERENCE 2
AUTHORS
CONSRTM IRGSP(International Rice Genome Sequencing Project)
TITLE Oryza sativa nipponbare(GA3) genomic DNA, chromosome 12
JOURNAL Unpublished (2004)
REFERENCE 3
AUTHORS Matsumoto,T., Wu,J., Kanamori,H., Katayose,Y., Fujisawa,M.,
Namiki,N., Mizuno,H., Yamamoto,K., Antonio,B.A., Baba,T.,
Sakata,K., Nagamura,Y., Aoki,H., Arikawa,K., Arita,K., Bito,T.,
Chiden,Y., Fujitsuka,N., Fukunaka,R., Hamada,M., Harada,C.,
Hayashi,A., Hijishita,S., Honda,M., Hosokawa,S., Ichikawa,Y.,
Idonuma,A., Iijima,M., Ikeda,M., Ikeno,M., Ito,K., Ito,S., Ito,T.,
Ito,Y., Ito,Y., Iwabuchi,A., Kamiya,K., Karasawa,W., Kurita,K.,
Katagiri,S., Kikuta,A., Kobayashi,H., Kobayashi,N., Machita,K.,
Maehara,T., Masukawa,M., Mizubayashi,T., Mukai,Y., Nagasaki,H.,
Nagata,Y., Naito,S., Nakashima,M., Nakama,Y., Nakamichi,Y.,
Nakamura,M., Meguro,A., Negishi,M., Ohta,I., Ohta,T., Okamoto,M.,
Ono,N., Saji,S., Sakaguchi,M., Sakai,K., Shibata,M., Shimokawa,T.,
Song,J., Takazaki,Y., Terasawa,K., Tsugane,M., Tsuji,K., Ueda,S.,
Waki,K., Yamagata,H., Yamamoto,M., Yamamoto,S., Yamane,H.,
Yoshiki,S., Yoshihara,R., Yukawa,K., Zhong,H., Yano,M., Yuan,Q.,
Ouyang,S., Liu,J., Jones,K.M., Gansberger,K., Moffat,K., Hill,J.,
Bera,J., Fadrosh,D., Jin,S., Johri,S., Kim,M., Overton,L.,
Reardon,M., Tsitrin,T., Vuong,H., Weaver,B., Ciecko,A., Tallon,L.,
Jackson,J., Pai,G., Aken,S.V., Utterback,T., Reidmuller,S.,
Feldblyum,T., Hsiao,J., Zismann,V., Iobst,S., de Vazeille,A.R.,
Buell,C.R., Ying,K., Li,Y., Lu,T., Huang,Y., Zhao,Q., Feng,Q.,
Zhang,L., Zhu,J., Weng,Q., Mu,J., Lu,Y., Fan,D., Liu,Y., Guan,J.,
Zhang,Y., Yu,S., Liu,X., Zhang,Y., Hong,G., Han,B., Choisne,N.,
Demange,N., Orjeda,G., Samain,S., Cattolico,L., Pelletier,E.,
Couloux,A., Segurens,B., Wincker,P., D'Hont,A., Scarpelli,C.,
Weissenbach,J., Salanoubat,M., Quetier,F., Yu,Y., Kim,H.R.,
Rambo,T., Currie,J., Collura,K., Luo,M., Yang,T., Ammiraju,J.S.S.,
Engler,F., Soderlund,C., Wing,R.A., Palmer,L.E., de la Bastide,M.,
Spiegel,L., Nascimento,L., Zutavern,T., O'Shaughnessy,A., Dike,S.,
Dedhia,N., Preston,R., Balija,V., McCombie,W.R., Chow,T., Chen,H.,
Chung,M., Chen,C., Shaw,J., Wu,H., Hsiao,K., Chao,Y., Chu,M.,
Cheng,C., Hour,A., Lee,P., Lin,S., Lin,Y., Liou,J., Liu,S.,
Hsing,Y., Raghuvanshi,S., Mohanty,A., Bharti,A.K., Gaur,A.,
Gupta,V., Kumar,D., Ravi,V., Vij,S., Kapur,A., Khurana,P.,
Khurana,P., Khurana,J.P., Tyagi,A.K., Gaikwad,K., Singh,A.,
Dalal,V., Srivastava,S., Dixit,A., Pal,A.K., Ghazi,I.A., Yadav,M.,
Pandit,A., Bhargava,A., Sureshbabu,K., Batra,K., Sharma,T.R.,
Mohapatra,T., Singh,N.K., Messing,J., Nelson,A.B., Fuks,G.,
Kavchok,S., Keizer,G., Linton,E., Llaca,V., Song,R., Tanyolac,B.,
Young,S., Ho-Il,K., Hahn,J.H., Sangsakoo,G., Vanavichit,A., de
Mattos,Luiz.A.T., Zimmer,P.D., Malone,G., Dellagostin,O., de
Oliveira,A.C., Bevan,M., Bancroft,I., Minx,P., Cordum,H.,
Wilson,R., Cheng,Z., Jin,W., Jiang,J., Leong,S.A., Iwama,H.,
Gojobori,T., Itoh,T., Niimura,Y., Fujii,Y., Habara,T., Sakai,H.,
Sato,Y., Wilson,G., Kumar,K., McCouch,S., Juretic,N., Hoen,D.,
Wright,S., Bruskiewich,R., Bureau,T., Miyao,A., Hirochika,H.,
Nishikawa,T., Kadowaki,K., Sugiura,M., Burr,B. and Sasaki,T.
CONSRTM International Rice Genome Sequencing Project
TITLE The map-based sequence of the rice genome
JOURNAL Nature 436, 793-800 (2005)
REFERENCE 4
AUTHORS
CONSRTM The Rice Annotation Project (RAP)
TITLE The Second Rice Annotation Project Meeting (RAP2)
JOURNAL Unpublished (2006)
REFERENCE 5
AUTHORS Ohyanagi,H., Tanaka,T., Sakai,H., Shigemoto,Y., Yamaguchi,K.,
Habara,T., Fujii,Y., Antonio,B.A., Nagamura,Y., Imanishi,T.,
Ikeo,K., Itoh,T., Gojobori,T. and Sasaki,T.
TITLE The Rice Annotation Project Database (RAP-DB): hub for Oryza
sativa ssp. japonica genome information
JOURNAL Nucleic Acids Res. 34, D741-D744 (2006)
REFERENCE 6
AUTHORS Itoh,T., Tanaka,T., Barrero,R.A., Yamasaki,C., Fujii,Y.,
Hilton,P.B., Antonio,B.A., Aono,H., Apweiler,R., Bruskiewich,R.,
Bureau,T., Burr,F., Costa de Oliveira,A., Fuks,G., Habara,T.,
Haberer,G., Han,B., Harada,E., Hiraki,A.T., Hirochika,H., Hoen,D.,
Hokari,H., Hosokawa,S., Hsing,Y., Ikawa,H., Ikeo,K., Imanishi,T.,
Ito,Y., Jaiswal,P., Kanno,M., Kawahara,Y., Kawamura,T.,
Kawashima,H., Khurana,J.P., Kikuchi,S., Komatsu,S., Koyanagi,K.O.,
Kubooka,H., Lieberherr,D., Lin,Y.C., Lonsdale,D., Matsumoto,T.,
Matsuya,A., McCombie,W.R., Messing,J., Miyao,A., Mulder,N.,
Nagamura,Y., Nam,J., Namiki,N., Numa,H., Nurimoto,S.,
O'donovan,C., Ohyanagi,H., Okido,T., Oota,S., Osato,N.,
Palmer,L.E., Quetier,F., Raghuvanshi,S., Saichi,N., Sakai,H.,
Sakai,Y., Sakata,K., Sakurai,T., Sato,F., Sato,Y., Schoof,H.,
Seki,M., Shibata,M., Shimizu,Y., Shinozaki,K., Shinso,Y.,
Singh,N.K., Smith-White,B., Takeda,J., Tanino,M., Tatusova,T.,
Thongjuea,S., Todokoro,F., Tsugane,M., Tyagi,A.K., Vanavichit,A.,
Wang,A., Wing,R.A., Yamaguchi,K., Yamamoto,M., Yamamoto,N., Yu,Y.,
Zhang,H., Zhao,Q., Higo,K., Burr,B., Gojobori,T. and Sasaki,T.
CONSRTM The Rice Annotation Project (RAP)
TITLE Curated Genome Annotation of Oryza sativa ssp. japonica and
Comparative Genome Analysis with Arabidopsis thaliana
JOURNAL Genome Res. 17, 175-183 (2007)
REFERENCE 7
AUTHORS Tanaka,T., Antonio,B.A., Kikuchi,S., Matsumoto,T., Nagamura,Y.,
Numa,H., Sakai,H., Wu,J., Itoh,T., Sasaki,T., Aono,R., Fujii,Y.,
Habara,T., Harada,E., Kanno,M., Kawahara,Y., Kawashima,H.,
Kubooka,H., Matsuya,A., Nakaoka,H., Saichi,N., Sanbonmatsu,R.,
Sato,Y., Shinso,Y., Suzuki,M., Takeda,J., Tanino,M., Todokoro,F.,
Yamaguchi,K., Yamamoto,N., Yamasaki,C., Imanishi,T., Okido,T.,
Tada,M., Ikeo,K., Tateno,Y., Gojobori,T., Lin,Y.C., Wei,F.J.,
Hsing,Y.I., Zhao,Q., Han,B., Kramer,M.R., McCombie,R.W.,
Lonsdale,D., O'Donovan,C.C., Whitfield,E.J., Apweiler,R.,
Koyanagi,K.O., Khurana,J.P., Raghuvanshi,S., Singh,N.K.,
Tyagi,A.K., Haberer,G., Fujisawa,M., Hosokawa,S., Ito,Y.,
Ikawa,H., Shibata,M., Yamamoto,M., Bruskiewich,R.M., Hoen,D.R.,
Bureau,TE., Namiki,N., Ohyanagi,H., Sakai,Y., Nobushima,S.,
Sakata,K., Barrero,R.A., Sato,Y., Souvorov,A., Smith-White, B.,
Tatusova,T., An,S., An,G., OOta,S., Fuks,G., Messing,J.,
Christie,K.R., Lieberherr,D., Kim,H., Zuccolo,A., Wing,R.A.,
Nobuta,K., Green,P.J., Lu,C., Meyers,BC., Chaparro,C., Piegu,B.,
Panaud,O. and Echeverria,M.
CONSRTM The Rice Annotation Project (RAP)
TITLE The Rice Annotation Project Database (RAP-DB): 2008 update
JOURNAL Nucleic Acids Res. 36, D1028-D1033 (2008)
COMMENT The IRGSP pseudomolecules (Build 4.0).
The orientation of the sequence is the short arm to the long arm
of the chromosome.
Genoscope, Evry cedex, France, URL:http://www.genoscope.cns.fr/,
Tel:(33)0 1 60 87 25 00 Fax:(33)0 1 60 87 25 14
The position of gaps in this pseudomolecule with unknown size is
assigned 100 Ns based on the guideline set by DDBJ/EMBL/GenBank.
This sequence entry was annotated by the Rice Annotation Project.
http://rapdb.lab.nig.ac.jp/
FEATURES Qualifiers
source /chromosome="12"
/cultivar="Nipponbare"
/db_xref="taxon:39947"
/mol_type="genomic DNA"
/organism="Oryza sativa Japonica Group"
protein /gene="Os12g0594200"
/note="Vacuolar protein sorting-associated protein family
protein"
/note="ab initio prediction with EST support"
/note="contains InterPro domain(s): IPR009543"
/note="has GO asignment(s): GO:0008104"
/transl_table=1
intron_pos 95:2 (1/32)
intron_pos 125:0 (2/32)
intron_pos 869:2 (3/32)
intron_pos 908:0 (4/32)
intron_pos 1174:0 (5/32)
intron_pos 1268:1 (6/32)
intron_pos 1428:0 (7/32)
intron_pos 1470:1 (8/32)
intron_pos 1512:0 (9/32)
intron_pos 1691:1 (10/32)
intron_pos 1710:0 (11/32)
intron_pos 1782:2 (12/32)
intron_pos 1915:1 (13/32)
intron_pos 2010:0 (14/32)
intron_pos 2038:2 (15/32)
intron_pos 2067:2 (16/32)
intron_pos 2155:0 (17/32)
intron_pos 2181:0 (18/32)
intron_pos 2248:0 (19/32)
intron_pos 2273:2 (20/32)
intron_pos 2354:0 (21/32)
intron_pos 2391:0 (22/32)
intron_pos 2447:0 (23/32)
intron_pos 2490:0 (24/32)
intron_pos 2520:0 (25/32)
intron_pos 2555:2 (26/32)
intron_pos 2605:1 (27/32)
intron_pos 2633:0 (28/32)
intron_pos 2665:0 (29/32)
intron_pos 2706:0 (30/32)
intron_pos 2734:0 (31/32)
intron_pos 2781:0 (32/32)
BEGIN
1 MVLAEAARAR LLAALRPWLA AEPRELRVEL GLLRSRAVAR GVELDAAALG DAVPGSFPAR
61 VDRVAVAEVE LVASPWAAPG LDAVVRGVDV ALTLREPAPK KQRPDIKEWI SNEKKRVIAA
121 MDPQGQMLHG KIEDLVSSLE DKFTSVFSTA LLNCSKVRFD DVTVQVRYLD DSHLVILRTH
181 DLQFGPELVF RCSLFRGLVG SYMPSRKKNH MFVKCDHFEF LLKGNDHTDC TVSLTGTTAS
241 VRLDNLHLTA FGIHVASAFW EIAPKFIPSL MVILEITSQK EDYEVRSGRE LWKIAAQKLE
301 NSIACRRFSL RKAMSCASFW QHYVHTYILL LSLLGYPSGE VIKRNCSRVQ STRKVRETIR
361 NHLKTVSELE EKIPVEAIAR GRSAARSKLT VSQQQSEQEL SKALLVSNTL KFLSPLLYVW
421 KFLVFICWSL WRFMSSRSRG CKSSVQNFPC ASDDSEIKVQ FSICLGELSV TFLPLSDHHF
481 TGTPKLNNGN KAYHIDTPSV HLVIKSSSIL YTDGFTTQSF FFVIGELKAD VSGIPKLLQA
541 ANGSITRRNS SFGTEEFSED INSKTILWSD SASMHPFSGK QPDESFSYNG DSSIALLQSD
601 MEELWSFWTV VSTFYNDSGV MHHEKPSVIF EFKSFLIDPY KSTSGFQQCR FTVGRVNLDV
661 DYLCASSTYL LYRQFVHYKE LKELTEKSAE FSNRSDSCAT RTSGIADKLR SFNQRLKFLI
721 ADAIPINTLQ ISALIAGPSI RLIFDKNSLL QNSKNKQVPL FSQMNNTSCI TLSLAYVECV
781 IWPASLSSLT QKADLHAKES HDTFDGVEEQ LESHRLALDS AGHVYSGTVV LDSCFKFADL
841 TLLVDHIEAN QQFHIFGPMS ANFQLSTSRK YASSFFVTRN ILSINLGGRI VGCMAFLFMD
901 DLFPIFQVIK GMQMLALNSE LGDIKYSQCF IGRLASFCNR HMDGSTMGTA VEYIIHEETV
961 DCYTELVAEM KLDLEPTHII VSASRDGLIF NPAMFSNSDI NYISSSTVFE GVAALESLDI
1021 LALGIWFSSR SSSLKLLLDG ECTDLLVNLS GIQSVVFENQ PQMSICDDIL QYSTVLSSSP
1081 YDKSQFILSD CVFHLCAGPN KDSLMNDKMQ VESISGCSTD SSGIYYFIEL EFTEVYIGDY
1141 NMHNFLIEVN KPSKQKIALL IHDDLQIVKC KIKGGLIFLE TLSLAKFVVC CKIYFRLLMD
1201 LSSWAASNSV KDSVTSVSAG SETTVTNRPH VSSGVHSQSE ESQLGSVKCL DVDLSQFSLT
1261 LAIADESGRY QGLTLEVDAI LQQLNLGMKI LFEVKRISIS SISIMPNTGH VKLRDVPAPR
1321 FRSSKSLALP SQSEIQEYLP FLEADNVLTY DHDAPSSSNS TVESSTGNPP LELSSHKSYI
1381 LRHFATYLKL EKKELNGDSN LMRSSGDWFG NGSVSGLEVT MSLSSIEMIL SLFAPFHEIL
1441 RSGSTQKEIQ TGDTPHQELL DNRDYTIPDG AIVAIRDLDQ QMYVSIKNTG KKYQVVGTYH
1501 YSLSSECALF KVKHHKGWRS DTPCISLLSL YAKTDEGKEL ALSFSHGSDL VEVSSSVDKP
1561 SSLWTTSPLR FDGFEDDGDD GKYCKIISRS SNHLVNKKSN YGIAFNDGLL EFVRKPGNPF
1621 KVKVLDESLF SDVARPFVPN VNLDNNTYLD VENELPFGMG DSLETGVSSQ HVIISIDKIV
1681 FTITHEVLDT DSRSFSGPFV VVKVSQNSEE GLSLSVQPLL RIYNKSDFPL ELRFQRPQKS
1741 SEEAAFVTVR SGDMVDESTG VFDSMDLSGG SKRALMSLAL GKPEISEHSG NFGPTTLVKW
1801 SEDITGEKAV RISGVMEKLN YNIRRAFSID SMKSSFSSLS CDVSIDGQHV TALHFLVHTL
1861 SREVPLHPTN GSPVFDRNAT VAFQLQREIF IYPTVQVYNF LQTDIHVILT DCEPENTRDD
1921 NFDIIGKQAT ITSGSSAYLY VNPAMFTFSV KLISYGSKSK AVNTSDWVKR MQKQISRAQF
1981 LDMELEFVIG TGRFHSSLRL LRQEKGFLEV AVFTRYTLHN TSDYPLLCTA PHKKSLPMSG
2041 TVKETINLPP QDGCILASMS MSSWFTRSSK LRIGLQHEKG SEAFIDLEAL SGFTEFSLEI
2101 HDNILPRRMA TFGMYLQPVL YDLPVPSQVV LIVPRYVFSN ESATAVAVRQ CFVEDDIDGV
2161 TIEAKQRATL HTWKPEKRRE FRRSQGTVTD DMKRGTLQDG KWKQFASVDV IQETASFVLH
2221 FSKPPKAALP YRIENCLNEA SIMYFQKDSV ESDVLHPQES EQYTWDDLSL PRKLNIDSSF
2281 NNGLSSGKQR FDESFGLRVF KIGYEVYADG LTRVLRICEH KDNPKADNIE HPIANVQFRM
2341 TYMCIHLLEK GQQGEEKGQS PSAILAARFQ HISADSVITD RYRHISLAIH SVNLDEKWEG
2401 ASFGSILRRN KLQDATLSEN ILRIIIKLNS TNSSVKQVQY CSIILQPIDL KVDEETLMKI
2461 VPFWRTSLAP PGTPSTQFYF RHFEVHPIKI IASFRPGSPY TTYSSAQEAL RALLHSVIKV
2521 PEISSSAVEL NGVLLNHALV TFRELFLKCA QHYSWYVLRA IYVTKGSSLL PPSFASIFDD
2581 SASSVIDVFF DPSDGSLNLP GLTIGMFKFI SKNMKSGGFS GTKRYLGDLG KTVKTASSNA
2641 LFAAVTEISD SIVRGAEANG FNGMVTGFHQ GILRLAMEPS VLGQAILEGG PDRKIKLDHS
2701 PGLDELYIEG YLQAMLDVMY KQEYLRIRVI DDQVILKNLP PNSALINEIV DNVKSFLVSK
2761 GLLKGDSSTI RPLRHLRNEP EWRIAPTVLT LAEHLFVSFA VRVLHREATK AIAGVVSKAK
2821 RPAGGGEDDG KGESPSSSSV GVLARRSRVW SVGRFAVSGM VAYVDGRLCR HIPNPIARRI
2881 VSGFLLSFID SRDND
//