LOCUS BAF27973.1 576 aa PRT CON 11-AUG-2012
DEFINITION Oryza sativa Japonica Group Os11g0246900 protein.
ACCESSION AP008217-673
PROTEIN_ID BAF27973.1
SOURCE Oryza sativa Japonica Group (Japanese rice)
ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP
clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
REFERENCE 1 (bases 1 to 30828668)
AUTHORS Sasaki,T.
TITLE Direct Submission
JOURNAL Submitted (25-OCT-2004) to the DDBJ/EMBL/GenBank databases.
Contact:Takuji Sasaki
National Institute of Agrobiological Sciences, Rice Genome
Research Program; Kannondai 2-1-2, Tsukuba, Ibaraki 305-8602, Japan
URL :http://rgp.dna.affrc.go.jp/
REFERENCE 2
AUTHORS
CONSRTM IRGSP(International Rice Genome Sequencing Project)
TITLE Oryza sativa nipponbare(GA3) genomic DNA, chromosome 11
JOURNAL Unpublished (2004)
REFERENCE 3
AUTHORS Matsumoto,T., Wu,J., Kanamori,H., Katayose,Y., Fujisawa,M.,
Namiki,N., Mizuno,H., Yamamoto,K., Antonio,B.A., Baba,T.,
Sakata,K., Nagamura,Y., Aoki,H., Arikawa,K., Arita,K., Bito,T.,
Chiden,Y., Fujitsuka,N., Fukunaka,R., Hamada,M., Harada,C.,
Hayashi,A., Hijishita,S., Honda,M., Hosokawa,S., Ichikawa,Y.,
Idonuma,A., Iijima,M., Ikeda,M., Ikeno,M., Ito,K., Ito,S., Ito,T.,
Ito,Y., Ito,Y., Iwabuchi,A., Kamiya,K., Karasawa,W., Kurita,K.,
Katagiri,S., Kikuta,A., Kobayashi,H., Kobayashi,N., Machita,K.,
Maehara,T., Masukawa,M., Mizubayashi,T., Mukai,Y., Nagasaki,H.,
Nagata,Y., Naito,S., Nakashima,M., Nakama,Y., Nakamichi,Y.,
Nakamura,M., Meguro,A., Negishi,M., Ohta,I., Ohta,T., Okamoto,M.,
Ono,N., Saji,S., Sakaguchi,M., Sakai,K., Shibata,M., Shimokawa,T.,
Song,J., Takazaki,Y., Terasawa,K., Tsugane,M., Tsuji,K., Ueda,S.,
Waki,K., Yamagata,H., Yamamoto,M., Yamamoto,S., Yamane,H.,
Yoshiki,S., Yoshihara,R., Yukawa,K., Zhong,H., Yano,M., Yuan,Q.,
Ouyang,S., Liu,J., Jones,K.M., Gansberger,K., Moffat,K., Hill,J.,
Bera,J., Fadrosh,D., Jin,S., Johri,S., Kim,M., Overton,L.,
Reardon,M., Tsitrin,T., Vuong,H., Weaver,B., Ciecko,A., Tallon,L.,
Jackson,J., Pai,G., Aken,S.V., Utterback,T., Reidmuller,S.,
Feldblyum,T., Hsiao,J., Zismann,V., Iobst,S., de Vazeille,A.R.,
Buell,C.R., Ying,K., Li,Y., Lu,T., Huang,Y., Zhao,Q., Feng,Q.,
Zhang,L., Zhu,J., Weng,Q., Mu,J., Lu,Y., Fan,D., Liu,Y., Guan,J.,
Zhang,Y., Yu,S., Liu,X., Zhang,Y., Hong,G., Han,B., Choisne,N.,
Demange,N., Orjeda,G., Samain,S., Cattolico,L., Pelletier,E.,
Couloux,A., Segurens,B., Wincker,P., D'Hont,A., Scarpelli,C.,
Weissenbach,J., Salanoubat,M., Quetier,F., Yu,Y., Kim,H.R.,
Rambo,T., Currie,J., Collura,K., Luo,M., Yang,T., Ammiraju,J.S.S.,
Engler,F., Soderlund,C., Wing,R.A., Palmer,L.E., de la Bastide,M.,
Spiegel,L., Nascimento,L., Zutavern,T., O'Shaughnessy,A., Dike,S.,
Dedhia,N., Preston,R., Balija,V., McCombie,W.R., Chow,T., Chen,H.,
Chung,M., Chen,C., Shaw,J., Wu,H., Hsiao,K., Chao,Y., Chu,M.,
Cheng,C., Hour,A., Lee,P., Lin,S., Lin,Y., Liou,J., Liu,S.,
Hsing,Y., Raghuvanshi,S., Mohanty,A., Bharti,A.K., Gaur,A.,
Gupta,V., Kumar,D., Ravi,V., Vij,S., Kapur,A., Khurana,P.,
Khurana,P., Khurana,J.P., Tyagi,A.K., Gaikwad,K., Singh,A.,
Dalal,V., Srivastava,S., Dixit,A., Pal,A.K., Ghazi,I.A., Yadav,M.,
Pandit,A., Bhargava,A., Sureshbabu,K., Batra,K., Sharma,T.R.,
Mohapatra,T., Singh,N.K., Messing,J., Nelson,A.B., Fuks,G.,
Kavchok,S., Keizer,G., Linton,E., Llaca,V., Song,R., Tanyolac,B.,
Young,S., Ho-Il,K., Hahn,J.H., Sangsakoo,G., Vanavichit,A., de
Mattos,Luiz.A.T., Zimmer,P.D., Malone,G., Dellagostin,O., de
Oliveira,A.C., Bevan,M., Bancroft,I., Minx,P., Cordum,H.,
Wilson,R., Cheng,Z., Jin,W., Jiang,J., Leong,S.A., Iwama,H.,
Gojobori,T., Itoh,T., Niimura,Y., Fujii,Y., Habara,T., Sakai,H.,
Sato,Y., Wilson,G., Kumar,K., McCouch,S., Juretic,N., Hoen,D.,
Wright,S., Bruskiewich,R., Bureau,T., Miyao,A., Hirochika,H.,
Nishikawa,T., Kadowaki,K., Sugiura,M., Burr,B. and Sasaki,T.
CONSRTM International Rice Genome Sequencing Project
TITLE The map-based sequence of the rice genome
JOURNAL Nature 436, 793-800 (2005)
REFERENCE 4
AUTHORS
CONSRTM The Rice Annotation Project (RAP)
TITLE The Second Rice Annotation Project Meeting (RAP2)
JOURNAL Unpublished (2006)
REFERENCE 5
AUTHORS Ohyanagi,H., Tanaka,T., Sakai,H., Shigemoto,Y., Yamaguchi,K.,
Habara,T., Fujii,Y., Antonio,B.A., Nagamura,Y., Imanishi,T.,
Ikeo,K., Itoh,T., Gojobori,T. and Sasaki,T.
TITLE The Rice Annotation Project Database (RAP-DB): hub for Oryza
sativa ssp. japonica genome information
JOURNAL Nucleic Acids Res. 34, D741-D744 (2006)
REFERENCE 6
AUTHORS Itoh,T., Tanaka,T., Barrero,R.A., Yamasaki,C., Fujii,Y.,
Hilton,P.B., Antonio,B.A., Aono,H., Apweiler,R., Bruskiewich,R.,
Bureau,T., Burr,F., Costa de Oliveira,A., Fuks,G., Habara,T.,
Haberer,G., Han,B., Harada,E., Hiraki,A.T., Hirochika,H., Hoen,D.,
Hokari,H., Hosokawa,S., Hsing,Y., Ikawa,H., Ikeo,K., Imanishi,T.,
Ito,Y., Jaiswal,P., Kanno,M., Kawahara,Y., Kawamura,T.,
Kawashima,H., Khurana,J.P., Kikuchi,S., Komatsu,S., Koyanagi,K.O.,
Kubooka,H., Lieberherr,D., Lin,Y.C., Lonsdale,D., Matsumoto,T.,
Matsuya,A., McCombie,W.R., Messing,J., Miyao,A., Mulder,N.,
Nagamura,Y., Nam,J., Namiki,N., Numa,H., Nurimoto,S.,
O'donovan,C., Ohyanagi,H., Okido,T., Oota,S., Osato,N.,
Palmer,L.E., Quetier,F., Raghuvanshi,S., Saichi,N., Sakai,H.,
Sakai,Y., Sakata,K., Sakurai,T., Sato,F., Sato,Y., Schoof,H.,
Seki,M., Shibata,M., Shimizu,Y., Shinozaki,K., Shinso,Y.,
Singh,N.K., Smith-White,B., Takeda,J., Tanino,M., Tatusova,T.,
Thongjuea,S., Todokoro,F., Tsugane,M., Tyagi,A.K., Vanavichit,A.,
Wang,A., Wing,R.A., Yamaguchi,K., Yamamoto,M., Yamamoto,N., Yu,Y.,
Zhang,H., Zhao,Q., Higo,K., Burr,B., Gojobori,T. and Sasaki,T.
CONSRTM The Rice Annotation Project (RAP)
TITLE Curated Genome Annotation of Oryza sativa ssp. japonica and
Comparative Genome Analysis with Arabidopsis thaliana
JOURNAL Genome Res. 17, 175-183 (2007)
REFERENCE 7
AUTHORS Tanaka,T., Antonio,B.A., Kikuchi,S., Matsumoto,T., Nagamura,Y.,
Numa,H., Sakai,H., Wu,J., Itoh,T., Sasaki,T., Aono,R., Fujii,Y.,
Habara,T., Harada,E., Kanno,M., Kawahara,Y., Kawashima,H.,
Kubooka,H., Matsuya,A., Nakaoka,H., Saichi,N., Sanbonmatsu,R.,
Sato,Y., Shinso,Y., Suzuki,M., Takeda,J., Tanino,M., Todokoro,F.,
Yamaguchi,K., Yamamoto,N., Yamasaki,C., Imanishi,T., Okido,T.,
Tada,M., Ikeo,K., Tateno,Y., Gojobori,T., Lin,Y.C., Wei,F.J.,
Hsing,Y.I., Zhao,Q., Han,B., Kramer,M.R., McCombie,R.W.,
Lonsdale,D., O'Donovan,C.C., Whitfield,E.J., Apweiler,R.,
Koyanagi,K.O., Khurana,J.P., Raghuvanshi,S., Singh,N.K.,
Tyagi,A.K., Haberer,G., Fujisawa,M., Hosokawa,S., Ito,Y.,
Ikawa,H., Shibata,M., Yamamoto,M., Bruskiewich,R.M., Hoen,D.R.,
Bureau,TE., Namiki,N., Ohyanagi,H., Sakai,Y., Nobushima,S.,
Sakata,K., Barrero,R.A., Sato,Y., Souvorov,A., Smith-White, B.,
Tatusova,T., An,S., An,G., OOta,S., Fuks,G., Messing,J.,
Christie,K.R., Lieberherr,D., Kim,H., Zuccolo,A., Wing,R.A.,
Nobuta,K., Green,P.J., Lu,C., Meyers,BC., Chaparro,C., Piegu,B.,
Panaud,O. and Echeverria,M.
CONSRTM The Rice Annotation Project (RAP)
TITLE The Rice Annotation Project Database (RAP-DB): 2008 update
JOURNAL Nucleic Acids Res. 36, D1028-D1033 (2008)
COMMENT The IRGSP pseudomolecules (Build 4.0).
The orientation of the sequence is the short arm to the long arm
of the chromosome.
The Institute for Genomic Research Rockville, MD 20850, USA,
URL:http://www.tigr.org/, Tel:(301)838-3558 Fax:(301)838-0208
and
The Plant Genome Initiative at Rutgers, Waksman Institute, Rutgers
University, Piscataway, NJ 08854, USA,
URL:http://pgir.rutgers.edu/, Tel:732-445-4257 Fax:732-445-5735
and
Genoscope, Evry cedex, France, URL:http://www.genoscope.cns.fr/,
Tel:(33)0 1 60 87 25 00 Fax:(33)0 1 60 87 25 14
and
Indian Initiative for Rice Genome Sequencing, Department of Plant
Molecular Biology, University of Delhi South Campus, New Delhi
110021, India, Tel:91-11-24673216 Fax:91-11-24109430
Indian Initiative for Rice Genome Sequencing, National Research
Centre for Plant Biotechnology, Indian Agricultural Research
Institute, New Delhi 110012, India, Tel:91-11-25860186
The position of gaps in this pseudomolecule with unknown size is
assigned 100 Ns based on the guideline set by DDBJ/EMBL/GenBank.
This sequence entry was annotated by the Rice Annotation Project.
http://rapdb.lab.nig.ac.jp/
FEATURES Qualifiers
source /chromosome="11"
/cultivar="Nipponbare"
/db_xref="taxon:39947"
/mol_type="genomic DNA"
/organism="Oryza sativa Japonica Group"
protein /gene="Os11g0246900"
/note="Ankyrin repeat containing protein"
/note="The start codon is not identified."
/note="contains InterPro domain(s): IPR002110"
/note="supported by AK102030"
/transl_table=1
intron_pos 16:1 (1/3)
intron_pos 168:2 (2/3)
intron_pos 313:0 (3/3)
BEGIN
1 WRSSWIHRRW TWTSPAPPPK TAKACAAAKK PRSVSSDFGE ELDLEQLGAK QQQQQQERKL
61 SRQDRVELSR SFQHAVSSHD WDGAEALVRR ADAQGLNDVL CVAVDAIWFL SDKEELAAVV
121 ALIRRIVSEG ANDFTRAALR TSFLASCVSA CRGRTTSLAD AVSFMGQKLN ERLQESHGDE
181 VLKAEASAKV HKFTEWALKC IGLHSRVREN KGRGNHGTII EVQLQLSAFK TFLDLADNDL
241 TGKDFTEAFD AACFPLTLFS NTFDQGWASG ISAAAIQGLL ELLVEGGADN VNQCFLEAAR
301 YGSTELVRIL LQIARRNSLD IDVDLALGFA AHYGKLDTMG CLVEEGNAVA FLGPLMRAAE
361 RGCLQVVEWF VNLGCRDMEL CLALTAATSS SQVAVAAYLL PLVPKHVLAP LSVEILKAAG
421 ERSTGSLHGV DFLLRSNFLN DPAATYAVAD NIAKSADEAV DAKLRSFMLE HWSEAAFSEG
481 FASAQEHFVN FMRIMEKGES PICLRDLPLE LVIAMAYLPL YRECVESGGR LLPQKLRGQL
541 VEAAGRLEGR QLDRASQGTE LLAILEHHLP CFMIQT
//