LOCUS BAF25685.1 528 aa PRT CON 11-AUG-2012
DEFINITION Oryza sativa Japonica Group Os09g0533900 protein.
ACCESSION AP008215-1321
PROTEIN_ID BAF25685.1
SOURCE Oryza sativa Japonica Group (Japanese rice)
ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP
clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
REFERENCE 1 (bases 1 to 23843360)
AUTHORS Sasaki,T.
TITLE Direct Submission
JOURNAL Submitted (25-OCT-2004) to the DDBJ/EMBL/GenBank databases.
Contact:Takuji Sasaki
National Institute of Agrobiological Sciences, Rice Genome
Research Program; Kannondai 2-1-2, Tsukuba, Ibaraki 305-8602, Japan
URL :http://rgp.dna.affrc.go.jp/
REFERENCE 2
AUTHORS
CONSRTM IRGSP(International Rice Genome Sequencing Project)
TITLE Oryza sativa nipponbare(GA3) genomic DNA, chromosome 9
JOURNAL Unpublished (2004)
REFERENCE 3
AUTHORS Matsumoto,T., Wu,J., Kanamori,H., Katayose,Y., Fujisawa,M.,
Namiki,N., Mizuno,H., Yamamoto,K., Antonio,B.A., Baba,T.,
Sakata,K., Nagamura,Y., Aoki,H., Arikawa,K., Arita,K., Bito,T.,
Chiden,Y., Fujitsuka,N., Fukunaka,R., Hamada,M., Harada,C.,
Hayashi,A., Hijishita,S., Honda,M., Hosokawa,S., Ichikawa,Y.,
Idonuma,A., Iijima,M., Ikeda,M., Ikeno,M., Ito,K., Ito,S., Ito,T.,
Ito,Y., Ito,Y., Iwabuchi,A., Kamiya,K., Karasawa,W., Kurita,K.,
Katagiri,S., Kikuta,A., Kobayashi,H., Kobayashi,N., Machita,K.,
Maehara,T., Masukawa,M., Mizubayashi,T., Mukai,Y., Nagasaki,H.,
Nagata,Y., Naito,S., Nakashima,M., Nakama,Y., Nakamichi,Y.,
Nakamura,M., Meguro,A., Negishi,M., Ohta,I., Ohta,T., Okamoto,M.,
Ono,N., Saji,S., Sakaguchi,M., Sakai,K., Shibata,M., Shimokawa,T.,
Song,J., Takazaki,Y., Terasawa,K., Tsugane,M., Tsuji,K., Ueda,S.,
Waki,K., Yamagata,H., Yamamoto,M., Yamamoto,S., Yamane,H.,
Yoshiki,S., Yoshihara,R., Yukawa,K., Zhong,H., Yano,M., Yuan,Q.,
Ouyang,S., Liu,J., Jones,K.M., Gansberger,K., Moffat,K., Hill,J.,
Bera,J., Fadrosh,D., Jin,S., Johri,S., Kim,M., Overton,L.,
Reardon,M., Tsitrin,T., Vuong,H., Weaver,B., Ciecko,A., Tallon,L.,
Jackson,J., Pai,G., Aken,S.V., Utterback,T., Reidmuller,S.,
Feldblyum,T., Hsiao,J., Zismann,V., Iobst,S., de Vazeille,A.R.,
Buell,C.R., Ying,K., Li,Y., Lu,T., Huang,Y., Zhao,Q., Feng,Q.,
Zhang,L., Zhu,J., Weng,Q., Mu,J., Lu,Y., Fan,D., Liu,Y., Guan,J.,
Zhang,Y., Yu,S., Liu,X., Zhang,Y., Hong,G., Han,B., Choisne,N.,
Demange,N., Orjeda,G., Samain,S., Cattolico,L., Pelletier,E.,
Couloux,A., Segurens,B., Wincker,P., D'Hont,A., Scarpelli,C.,
Weissenbach,J., Salanoubat,M., Quetier,F., Yu,Y., Kim,H.R.,
Rambo,T., Currie,J., Collura,K., Luo,M., Yang,T., Ammiraju,J.S.S.,
Engler,F., Soderlund,C., Wing,R.A., Palmer,L.E., de la Bastide,M.,
Spiegel,L., Nascimento,L., Zutavern,T., O'Shaughnessy,A., Dike,S.,
Dedhia,N., Preston,R., Balija,V., McCombie,W.R., Chow,T., Chen,H.,
Chung,M., Chen,C., Shaw,J., Wu,H., Hsiao,K., Chao,Y., Chu,M.,
Cheng,C., Hour,A., Lee,P., Lin,S., Lin,Y., Liou,J., Liu,S.,
Hsing,Y., Raghuvanshi,S., Mohanty,A., Bharti,A.K., Gaur,A.,
Gupta,V., Kumar,D., Ravi,V., Vij,S., Kapur,A., Khurana,P.,
Khurana,P., Khurana,J.P., Tyagi,A.K., Gaikwad,K., Singh,A.,
Dalal,V., Srivastava,S., Dixit,A., Pal,A.K., Ghazi,I.A., Yadav,M.,
Pandit,A., Bhargava,A., Sureshbabu,K., Batra,K., Sharma,T.R.,
Mohapatra,T., Singh,N.K., Messing,J., Nelson,A.B., Fuks,G.,
Kavchok,S., Keizer,G., Linton,E., Llaca,V., Song,R., Tanyolac,B.,
Young,S., Ho-Il,K., Hahn,J.H., Sangsakoo,G., Vanavichit,A., de
Mattos,Luiz.A.T., Zimmer,P.D., Malone,G., Dellagostin,O., de
Oliveira,A.C., Bevan,M., Bancroft,I., Minx,P., Cordum,H.,
Wilson,R., Cheng,Z., Jin,W., Jiang,J., Leong,S.A., Iwama,H.,
Gojobori,T., Itoh,T., Niimura,Y., Fujii,Y., Habara,T., Sakai,H.,
Sato,Y., Wilson,G., Kumar,K., McCouch,S., Juretic,N., Hoen,D.,
Wright,S., Bruskiewich,R., Bureau,T., Miyao,A., Hirochika,H.,
Nishikawa,T., Kadowaki,K., Sugiura,M., Burr,B. and Sasaki,T.
CONSRTM International Rice Genome Sequencing Project
TITLE The map-based sequence of the rice genome
JOURNAL Nature 436, 793-800 (2005)
REFERENCE 4
AUTHORS
CONSRTM The Rice Annotation Project (RAP)
TITLE The Second Rice Annotation Project Meeting (RAP2)
JOURNAL Unpublished (2006)
REFERENCE 5
AUTHORS Ohyanagi,H., Tanaka,T., Sakai,H., Shigemoto,Y., Yamaguchi,K.,
Habara,T., Fujii,Y., Antonio,B.A., Nagamura,Y., Imanishi,T.,
Ikeo,K., Itoh,T., Gojobori,T. and Sasaki,T.
TITLE The Rice Annotation Project Database (RAP-DB): hub for Oryza
sativa ssp. japonica genome information
JOURNAL Nucleic Acids Res. 34, D741-D744 (2006)
REFERENCE 6
AUTHORS Itoh,T., Tanaka,T., Barrero,R.A., Yamasaki,C., Fujii,Y.,
Hilton,P.B., Antonio,B.A., Aono,H., Apweiler,R., Bruskiewich,R.,
Bureau,T., Burr,F., Costa de Oliveira,A., Fuks,G., Habara,T.,
Haberer,G., Han,B., Harada,E., Hiraki,A.T., Hirochika,H., Hoen,D.,
Hokari,H., Hosokawa,S., Hsing,Y., Ikawa,H., Ikeo,K., Imanishi,T.,
Ito,Y., Jaiswal,P., Kanno,M., Kawahara,Y., Kawamura,T.,
Kawashima,H., Khurana,J.P., Kikuchi,S., Komatsu,S., Koyanagi,K.O.,
Kubooka,H., Lieberherr,D., Lin,Y.C., Lonsdale,D., Matsumoto,T.,
Matsuya,A., McCombie,W.R., Messing,J., Miyao,A., Mulder,N.,
Nagamura,Y., Nam,J., Namiki,N., Numa,H., Nurimoto,S.,
O'donovan,C., Ohyanagi,H., Okido,T., Oota,S., Osato,N.,
Palmer,L.E., Quetier,F., Raghuvanshi,S., Saichi,N., Sakai,H.,
Sakai,Y., Sakata,K., Sakurai,T., Sato,F., Sato,Y., Schoof,H.,
Seki,M., Shibata,M., Shimizu,Y., Shinozaki,K., Shinso,Y.,
Singh,N.K., Smith-White,B., Takeda,J., Tanino,M., Tatusova,T.,
Thongjuea,S., Todokoro,F., Tsugane,M., Tyagi,A.K., Vanavichit,A.,
Wang,A., Wing,R.A., Yamaguchi,K., Yamamoto,M., Yamamoto,N., Yu,Y.,
Zhang,H., Zhao,Q., Higo,K., Burr,B., Gojobori,T. and Sasaki,T.
CONSRTM The Rice Annotation Project (RAP)
TITLE Curated Genome Annotation of Oryza sativa ssp. japonica and
Comparative Genome Analysis with Arabidopsis thaliana
JOURNAL Genome Res. 17, 175-183 (2007)
REFERENCE 7
AUTHORS Tanaka,T., Antonio,B.A., Kikuchi,S., Matsumoto,T., Nagamura,Y.,
Numa,H., Sakai,H., Wu,J., Itoh,T., Sasaki,T., Aono,R., Fujii,Y.,
Habara,T., Harada,E., Kanno,M., Kawahara,Y., Kawashima,H.,
Kubooka,H., Matsuya,A., Nakaoka,H., Saichi,N., Sanbonmatsu,R.,
Sato,Y., Shinso,Y., Suzuki,M., Takeda,J., Tanino,M., Todokoro,F.,
Yamaguchi,K., Yamamoto,N., Yamasaki,C., Imanishi,T., Okido,T.,
Tada,M., Ikeo,K., Tateno,Y., Gojobori,T., Lin,Y.C., Wei,F.J.,
Hsing,Y.I., Zhao,Q., Han,B., Kramer,M.R., McCombie,R.W.,
Lonsdale,D., O'Donovan,C.C., Whitfield,E.J., Apweiler,R.,
Koyanagi,K.O., Khurana,J.P., Raghuvanshi,S., Singh,N.K.,
Tyagi,A.K., Haberer,G., Fujisawa,M., Hosokawa,S., Ito,Y.,
Ikawa,H., Shibata,M., Yamamoto,M., Bruskiewich,R.M., Hoen,D.R.,
Bureau,TE., Namiki,N., Ohyanagi,H., Sakai,Y., Nobushima,S.,
Sakata,K., Barrero,R.A., Sato,Y., Souvorov,A., Smith-White, B.,
Tatusova,T., An,S., An,G., OOta,S., Fuks,G., Messing,J.,
Christie,K.R., Lieberherr,D., Kim,H., Zuccolo,A., Wing,R.A.,
Nobuta,K., Green,P.J., Lu,C., Meyers,BC., Chaparro,C., Piegu,B.,
Panaud,O. and Echeverria,M.
CONSRTM The Rice Annotation Project (RAP)
TITLE The Rice Annotation Project Database (RAP-DB): 2008 update
JOURNAL Nucleic Acids Res. 36, D1028-D1033 (2008)
COMMENT The IRGSP pseudomolecules (Build 4.0).
The orientation of the sequence is the short arm to the long arm
of the chromosome.
National Institute of Agrobiological Sciences, Rice Genome
Research Program; Ibaraki 305-8602, Japan,
URL:http://rgp.dna.affrc.go.jp/, Tel:81-29-838-7441
Fax:81-29-838-7468
and
Rice Gene Discovery, BIOTEC and Kasetsart University, Nakron
Pathom, 73140, Thailand, URL:http://www.cs.ait.ac.th/nstda/biotec/
biotec.html, Tel:66-34-282-433 Fax:66-34-281-093
and
Rice Genome Sequencing Project, National Institute of Agricultural
Science and Technology(NIAST), RDA, 441-707, Korea,
URL:http://bioserver.myongji.ac.kr/ricemac.html,
Tel:82-31-290-0300 Fax:82-31-290-0307
and
Centro de Biotecnologia, UFPel Pelotas, RS, 96001-970, Brazil,
URL:http://www.ufpel.tche.br/faem/fitotecnia/fitomelhoramento/,
Tel:55-53-275-7263 Fax:55-53-2759031
The position of gaps in this pseudomolecule with unknown size is
assigned 100 Ns based on the guideline set by DDBJ/EMBL/GenBank.
This sequence entry was annotated by the Rice Annotation Project.
http://rapdb.lab.nig.ac.jp/
FEATURES Qualifiers
source /chromosome="9"
/cultivar="Nipponbare"
/db_xref="taxon:39947"
/mol_type="genomic DNA"
/organism="Oryza sativa Japonica Group"
protein /gene="Os09g0533900"
/note="Similar to CEL5=CELLULASE 5 (Fragment)"
/note="contains InterPro domain(s): IPR012343, IPR001701,
IPR008928"
/note="has GO asignment(s): GO:0005975"
/note="supported by AK100449"
/transl_table=1
intron_pos 74:1 (1/5)
intron_pos 169:0 (2/5)
intron_pos 315:0 (3/5)
intron_pos 364:1 (4/5)
intron_pos 420:0 (5/5)
BEGIN
1 MGSKTKGCCG WLIVALVASL VATAAVVAIM KKKVGGGSGR KLKPLPVPGP PGAIDSKYGD
61 ALGVALQFFQ VQKAGKLENN QIPWRGDSAL DDGKPAGLDL SKGMYDAGDH IKFSFPMAFT
121 ATVLSWSILE YGDQMSATKQ LDPALDALRW ITDFLVNAHP SDNVFYIQVG DPDLDHNCWE
181 RPETMSEKRP LTQINTKSPG SDVAAEAAAA MASASIVFKS RDTTYSDSLL QHAQKLFTFA
241 DTYKGLASDT YPKLQNYYNS TGYQDELLWA ASWLYHATGD QTYLSYVTVE NGKAFADWGR
301 PTWFSWDDKL AGTQVLLSRL NFFGSKQTSN AENMGLKMYR DTAEAVICGL LPDSPSATAS
361 RTGGGLVWIS GWNSLQHATN AAFLAVVYSD YMLTSQTAAV QCSGKYYSPT DIRNFAISQA
421 NYILGDNPMK LSYLVGYGSS YPQQVHHRGA SIPADAKTGC KGFQYLHSTS PNPNVAMGAL
481 VGGPFQNDTF VDSRDNAVQT ESSTYNSGTL VGLLSGLVTT SSVAQSFT
//