LOCUS BAE24214.1 959 aa PRT HTC 06-OCT-2010
DEFINITION Mus musculus protein ( Mus musculus adult male corpora
quadrigemina cDNA, RIKEN full-length enriched library,
clone:B230040B06 product:Annexin V-binding protein (ABP-
10) (Fragment) homolog [Rattus norvegicus], full insert
sequence. ).
ACCESSION AK140021-1
PROTEIN_ID BAE24214.1
SOURCE Mus musculus (house mouse)
ORGANISM Mus musculus
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE 1 (bases 1 to 2953)
AUTHORS Arakawa,T., Carninci,P., Fukuda,S., Hashizume,W., Hayashida,K.,
Hori,F., Iida,J., Imamura,K., Imotani,K., Itoh,M., Kanagawa,S.,
Kawai,J., Kojima,M., Konno,H., Murata,M., Nakamura,M.,
Ninomiya,N., Nishiyori,H., Nomura,K., Ohno,M., Sakazume,N.,
Sano,H., Sasaki,D., Shibata,K., Shiraki,T., Tagami,M., Tagami,Y.,
Waki,K., Watahiki,A., Muramatsu,M. and Hayashizaki,Y.
TITLE Direct Submission
JOURNAL Submitted (30-MAR-2004) to the DDBJ/EMBL/GenBank databases.
Contact:Yoshihide Hayashizaki
The Institute of Physical and Chemical Research (RIKEN), Omics
Science Center, RIKEN Yokohama Institute; 1-7-22 Suehiro-cho,
Tsurumi-ku, Yokohama, Kanagawa 230-0045, Japan
URL :http://www.osc.riken.jp/
REFERENCE 2
AUTHORS
CONSRTM The FANTOM Consortium, Riken Genome Exploration Research Group and
Genome Science Group (Genome Network Project Core Group)
TITLE The Transcriptional Landscape of the Mammalian Genome
JOURNAL Science 309, 1559-1563 (2005)
REFERENCE 3
AUTHORS
CONSRTM RIKEN Genome Exploration Research Group and Genome Science Group
(Genome Network Project Core Group) and the FANTOM Consortium
TITLE Antisense Transcription in the Mammalian Transcriptome
JOURNAL Science 309, 1564-1566 (2005)
REFERENCE 4
AUTHORS
CONSRTM The FANTOM Consortium and the RIKEN Genome Exploration Research
Group Phase I and II Team
TITLE Analysis of the mouse transcriptome based on functional annotation
of 60,770 full-length cDNAs
JOURNAL Nature 420, 563-573 (2002)
REFERENCE 5
AUTHORS
CONSRTM The RIKEN Genome Exploration Research Group Phase II Team and the
FANTOM Consortium
TITLE Functional annotation of a full-length mouse cDNA collection
JOURNAL Nature 409, 685-690 (2001)
REFERENCE 6
AUTHORS Carninci,P. and Hayashizaki,Y.
TITLE High-efficiency full-length cDNA cloning
JOURNAL Meth. Enzymol. 303, 19-44 (1999)
REFERENCE 7
AUTHORS Carninci,P., Shibata,Y., Hayatsu,N., Sugahara,Y., Shibata,K.,
Itoh,M., Konno,H., Okazaki,Y., Muramatsu,M. and Hayashizaki,Y.
TITLE Normalization and subtraction of cap-trapper-selected cDNAs to
prepare full-length cDNA libraries for rapid discovery of new genes
JOURNAL Genome Res. 10, 1617-1630 (2000)
REFERENCE 8
AUTHORS Shibata,K., Itoh,M., Aizawa,K., Nagaoka,S., Sasaki,N.,
Carninci,P., Konno,H., Akiyama,J., Nishi,K., Kitsunai,T.,
Tashiro,H., Itoh,M., Sumi,N., Ishii,Y., Nakamura,S., Hazama,M.,
Nishine,T., Harada,A., Yamamoto,R., Matsumoto,H., Sakaguchi,S.,
Ikegami,T., Kashiwagi,K., Fujiwake,S., Inoue,K., Togawa,Y.,
Izawa,M., Ohara,E., Watahiki,M., Yoneda,Y., Ishikawa,T., Ozawa,K.,
Tanaka,T., Matsuura,S., Kawai,J., Okazaki,Y., Muramatsu,M.,
Inoue,Y., Kira,A. and Hayashizaki,Y.
TITLE RIKEN integrated sequence analysis (RISA) system-384-format
sequencing pipeline with 384 multicapillary sequencer
JOURNAL Genome Res. 10, 1757-1771 (2000)
COMMENT cDNA library was prepared and sequenced in Mouse Genome
Encyclopedia Project of Genome Exploration Research Group in Riken
Genomic Sciences Center and Genome Science Laboratory in RIKEN.
Division of Experimental Animal Research in Riken contributed to
prepare mouse tissues.
Please visit our web site for further details.
URL:http://www.osc.riken.jp/
URL:http://fantom.gsc.riken.jp/
clone information is available at:
http://fantom.gsc.riken.jp/3/db/annotate/
main.cgi?masterid=B230040B06
FEATURES Qualifiers
source /clone="B230040B06"
/clone_lib="RIKEN full-length enriched mouse cDNA library"
/db_xref="FANTOM_DB:B230040B06"
/db_xref="MGI:3545297"
/db_xref="taxon:10090"
/dev_stage="adult"
/mol_type="mRNA"
/organism="Mus musculus"
/sex="male"
/strain="C57BL/6J"
/tissue_type="corpora quadrigemina"
protein /note="Annexin V-binding protein (ABP-10) (Fragment)
homolog [Rattus norvegicus] (UniProt|P70489, evidence:
FASTY, 87.8%ID, 95.3%length, match=1422)"
/note="putative"
/transl_table=1
BEGIN
1 MSDETELHSS EKGETEESVR KQGQQTKLSS DDRTERKSKH KSERRLSVLG RDGKPVSEYT
61 IKTDEHARKD NKKEKHLSSE KSKAEHKSRR SSDSKLQKDA LSSKQHSVTS QKRSERCSED
121 KCETDSTNAD SSFKPEELHH KERRRTKSLL EDKVVSKSKS KGQSKQTKAA ETEAQEGVTR
181 QVTTPKPDKE KNTEDNDTER QRKFKLEDRT SEETVTDPAL ENTVSSAHSA QKDSGHRAKL
241 ASIKEKHKTD KDSTSSKLER KVSDGHRSRS LKHSNKDMKK KEENKPDDKN GKEVDSSHEK
301 GRGNGPVTEK KLSRRLCENR RGSTSQEMAK EDKLVANMSG TTSSSSLQRP KKSTETTSIP
361 EQEPMEIDSE AAVENVSELS KTEDISSNSS QQDTDFENVT KHKATAGVLK DEFRTSMVDS
421 KPAAAVTCKS GRGLAVTSIS ERHADHKSTL TKKVHSQGNP SKAAPREREP IQRGAQEVSV
481 DSEVSRKALS RAPSENEKGQ KNLKGMSKTT EECGTHRNAS LEYSTDSDLL SSSGSVTVVP
541 QKESHNSNTI PVIDREAISE GGRASTSLAN HSDVPNQYST VKKSEVHKTN GSKEGNDGFT
601 VDMPTKANGG SKRHLSEDSQ ATLLYSKESK ISIPLADKSM SVTGDNKNIN KQRSLMGTAK
661 RESDLKVNPD IKQDSAAGEH VVDLSTRKEA ETVRRKHNKE IPTDVERKTE NSEVDTSARR
721 DSAPVPQQRH GKMERGAAGS GRRDKAFIAT STEGTDKGIM LNTVKTGDAT TTSSEVGEKG
781 TALPCTSIEA DEGFMMGACP KKHPLQVGAE ASECTVFAAA EEGKGVVTEG FAESEILLTS
841 SKEGESGECA VAESEDRVAG PLAAHTVQAE ANVNSITTEE KDDAVTSAGS EEKCGGSACT
901 VEGTATFIGE VESDGAVTSA GTEIRAGSLS SEDVDGSQEN RIQVGPKKET EGTVTCTET
//