LOCUS BAA81317.1 548 aa PRT BCT 07-OCT-2016
DEFINITION Aeropyrum pernix K1 phenylalanyl-tRNA synthetase beta
chain protein.
ACCESSION BA000002-1503
PROTEIN_ID BAA81317.1
SOURCE Aeropyrum pernix K1
ORGANISM Aeropyrum pernix K1
Archaea; Thermoproteota; Thermoprotei; Desulfurococcales;
Desulfurococcaceae; Aeropyrum.
REFERENCE 1 (bases 1 to 1669696)
AUTHORS Tanaka,T., Hino,Y., Kawarabayasi,Y., Kikuchi,H., Tajima,T.,
Sekigawa,T., Oguchi,A., Yamazaki,S., Tanikawa,S., Fujita,N. and
Harayama,S.
TITLE Direct Submission
JOURNAL Submitted (14-DEC-1998) to the DDBJ/EMBL/GenBank databases.
Contact:Director-General of Department of Biotechnology
National Institute of Technology and Evaluation (NITE), NITE
Genome Analysis Center (NGAC), Department of Biotechnology;
2-49-10 Nishihara, Shibuya-ku, Tokyo 151-0066, Japan
URL :http://www.bio.nite.go.jp/
REFERENCE 2
AUTHORS Kawarabayasi,Y., Hino,Y., Horikawa,H., Yamazaki,S., Haikawa,Y.,
Jin-no,K., Takahashi,M., Sekine,M., Baba,S., Ankai,A., Kosugi,H.,
Hosoyama,A., Fukui,S., Nagai,Y., Nishijima,K., Nakazawa,H.,
Takamiya,M., Masuda,S., Funahashi,T., Tanaka,T., Kudoh,Y.,
Yamazaki,J., Kushida,N., Oguchi,A., Aoki,K., Kubota,K.,
Nakamura,Y., Nomura,N., Sako,Y. and Kikuchi,H.
TITLE Complete Genome Sequence of an Aerobic Hyper-thermophilic
Crenarchaeon, Aeropyrum pernix K1.
JOURNAL DNA Res. 6, 83-101 (1999)
REFERENCE 3
AUTHORS Yamazaki,S., Kikuchi,H. and Kawarabayasi,Y.
TITLE Characterization of a Whole Set of tRNA Molecules in an Aerobic
Hyper-thermophilic Crenarchaeon, Aeropyrum pernix K1
JOURNAL DNA Res. 12, 403-416 (2005)
REFERENCE 4
AUTHORS Yamazaki,S., Yamazaki,J., Nishijima,K., Otsuka,R., Mise,M.,
Ishikawa,H., Sasaki,K., Tago,S. and Isono,K.
TITLE Proteome Analysis of an Aerobic Hyperthermophilic Crenarchaeon,
Aeropyrum pernix K1
JOURNAL Mol. Cell Proteomics 5, 811-823 (2006)
COMMENT Kawarabayasi, Y. is at National Institute of Advanced Industrial
Science and Technology (AIST), Tsukuba, Ibaraki 305-8566, Japan.
Tanaka, T., Hino, Y., Kawarabayasi, Y. and Kikuchi, H. are
original submitters.
Tajima, T., Sekigawa, T., Oguchi, A., Yamazaki, S., Tanikawa, S.,
Fujita, N. and Harayama S. submitted a revised version of the
genomic sequence with a single bp insertion and the result of
reannotation.
The genome of A. pernix was completely re-annotated in May 2006.
Single nucleotide was inserted at position 941,216.
Some ORFs were added or modified according to the result of
proteome analysis at NITE (Yamazaki, S. et al., Mol Cell
Proteomics. 5, 811-823 (2006)).
The detailed process of re-annotation is described in
http://www.bio.nite.go.jp/dogan/GeneralFeature?GENOME_ID=ape_G1.
All locus tags of A. pernix were replaced to new identifiers by
the following rules.
1. Prefix 'APE' or 'APES' was replaced by 'APE_'.
2. ORF numbers were inherited except for those with previous locus
tag starting with 'APES'.
3. An alphabetical character like 'a' was added after the ORF
number where new ORF was inserted between existing ORFs, including
those with previous locus tag starting with 'APES'.
4. Version number like '.1' was added where the start position of
existing ORF was changed.
Please visit our web site.
URL:http://www.bio.nite.go.jp/e/
DOGAN ; Database of the Genomes Analyzed at NITE
The database contains genome sequence data, physical maps
and the genomic and proteomic data of the microorganisms
analyzed.
URL:http://www.bio.nite.go.jp/dogan/Top
The microbial strain and microbial genomic DNA clones used for
the sequencing project are available through the NBRC.
URL:http://www.nbrc.nite.go.jp/e/index.html
FEATURES Qualifiers
source /culture_collection="NBRC:100138"
/db_xref="taxon:272557"
/focus
/mol_type="genomic DNA"
/note="strain coidentity: NBRC 100138"
/organism="Aeropyrum pernix K1"
/strain="K1"
source /db_xref="taxon:1032474"
/mol_type="genomic DNA"
/organism="Aeropyrum pernix ovoid virus 1"
/proviral
source /db_xref="taxon:1032473"
/mol_type="genomic DNA"
/organism="Aeropyrum pernix spindle-shaped virus 1"
/proviral
protein /EC_number="6.1.1.20"
/experiment="proteome analysis"
/gene="pheT"
/locus_tag="APE_2305"
/note="PheRS"
/note="phenylalanine--tRNA ligase beta chain"
/old_locus_tag="APE2305"
/transl_table=11
BEGIN
1 MPVIRVRRER LESLTGLSIG ELEELLFRLK CEVEEPEEGV LEVEVNPDRP DMYIGEGIAR
61 AVKGIAGVEE GWDPPELADT PLSLRVERVP QRPYIAAAVV YGVNVDELFL EELIQFQEKL
121 HDSLGRRRAK IAIGFHDLAK LPSASVEYRL MTLDTRMKPL GYGGSEMSFR EFLLADEKGS
181 LYGGLATKDN SHPFLLSGGE VIAAPPVINS EITRVEPGTR DLFIDVTGTS AELVAKTLDI
241 IVASLAEREG ARVGRVRLEG PGAVWASTPL LSEAAAKLDP GTVSKALGVD LTPEEAALHL
301 RRMRHNASPA GGLVNVRVPP FRVDILGEVD LVEDIAISIG YEALGPRWPG KFHGGSLRWE
361 THVYRAVKDL LVGLGFTEVL QLVLTSPRLV EAAGFSSMAV EVLNPVQQEY SVLRPTLLIT
421 LLQTLRENQH RRKPVKVFEA GNAVYLEDGE PRDEEKLALG VLDEEAGFED VQAPLYAVLR
481 IMGVDFEVEE ASHPMFMEGR TAAVKVGGER LGYIGEVKPE VLEAFGLEYP VAAAEISLEV
541 LARWTSRT
//