LOCUS       BAA80857.2               891 aa    PRT              BCT 07-OCT-2016
DEFINITION  Aeropyrum pernix K1 DNA-directed RNA polymerase subunit A protein.
ACCESSION   BA000002-1215
PROTEIN_ID  BAA80857.2
SOURCE      Aeropyrum pernix K1
  ORGANISM  Aeropyrum pernix K1
            Archaea; Thermoproteota; Thermoprotei; Desulfurococcales;
            Desulfurococcaceae; Aeropyrum.
REFERENCE   1  (bases 1 to 1669696)
  AUTHORS   Tanaka,T., Hino,Y., Kawarabayasi,Y., Kikuchi,H., Tajima,T.,
            Sekigawa,T., Oguchi,A., Yamazaki,S., Tanikawa,S., Fujita,N. and
            Harayama,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (14-DEC-1998) to the DDBJ/EMBL/GenBank databases.
            Contact:Director-General of Department of Biotechnology
            National Institute of Technology and Evaluation (NITE), NITE
            Genome Analysis Center (NGAC), Department of Biotechnology;
            2-49-10 Nishihara, Shibuya-ku, Tokyo 151-0066, Japan
            URL    :http://www.bio.nite.go.jp/
REFERENCE   2
  AUTHORS   Kawarabayasi,Y., Hino,Y., Horikawa,H., Yamazaki,S., Haikawa,Y.,
            Jin-no,K., Takahashi,M., Sekine,M., Baba,S., Ankai,A., Kosugi,H.,
            Hosoyama,A., Fukui,S., Nagai,Y., Nishijima,K., Nakazawa,H.,
            Takamiya,M., Masuda,S., Funahashi,T., Tanaka,T., Kudoh,Y.,
            Yamazaki,J., Kushida,N., Oguchi,A., Aoki,K., Kubota,K.,
            Nakamura,Y., Nomura,N., Sako,Y. and Kikuchi,H.
  TITLE     Complete Genome Sequence of an Aerobic Hyper-thermophilic
            Crenarchaeon, Aeropyrum pernix K1.
  JOURNAL   DNA Res. 6, 83-101 (1999)
REFERENCE   3
  AUTHORS   Yamazaki,S., Kikuchi,H. and Kawarabayasi,Y.
  TITLE     Characterization of a Whole Set of tRNA Molecules in an Aerobic
            Hyper-thermophilic Crenarchaeon, Aeropyrum pernix K1
  JOURNAL   DNA Res. 12, 403-416 (2005)
REFERENCE   4
  AUTHORS   Yamazaki,S., Yamazaki,J., Nishijima,K., Otsuka,R., Mise,M.,
            Ishikawa,H., Sasaki,K., Tago,S. and Isono,K.
  TITLE     Proteome Analysis of an Aerobic Hyperthermophilic Crenarchaeon,
            Aeropyrum pernix K1
  JOURNAL   Mol. Cell Proteomics 5, 811-823 (2006)
COMMENT     Kawarabayasi, Y. is at National Institute of Advanced Industrial
            Science and Technology (AIST), Tsukuba, Ibaraki 305-8566, Japan.
            
            Tanaka, T., Hino, Y., Kawarabayasi, Y. and Kikuchi, H. are
            original submitters.
            
            Tajima, T., Sekigawa, T., Oguchi, A., Yamazaki, S., Tanikawa, S.,
            Fujita, N. and Harayama S. submitted a revised version of the
            genomic sequence with a single bp insertion and the result of
            reannotation.
            
            The genome of A. pernix was completely re-annotated in May 2006.
            Single nucleotide was inserted at position 941,216.
            Some ORFs were added or modified according to the result of
            proteome analysis at NITE (Yamazaki, S. et al., Mol Cell
            Proteomics. 5, 811-823 (2006)).
            The detailed process of re-annotation is described in
            http://www.bio.nite.go.jp/dogan/GeneralFeature?GENOME_ID=ape_G1.
            
            All locus tags of A. pernix were replaced to new identifiers by
            the following rules.
            1. Prefix 'APE' or 'APES' was replaced by 'APE_'.
            2. ORF numbers were inherited except for those with previous locus
            tag starting with 'APES'.
            3. An alphabetical character like 'a' was added after the ORF
            number where new ORF was inserted between existing ORFs, including
            those with previous locus tag starting with 'APES'.
            4. Version number like '.1' was added where the start position of
            existing ORF was changed.
            
            Please visit our web site.
            URL:http://www.bio.nite.go.jp/e/
            
            DOGAN ; Database of the Genomes Analyzed at NITE
            The database contains genome sequence data, physical maps
            and the genomic and proteomic data of the microorganisms
            analyzed.
            URL:http://www.bio.nite.go.jp/dogan/Top
            
            The microbial strain and microbial genomic DNA clones used for
            the sequencing project are available through the NBRC.
            URL:http://www.nbrc.nite.go.jp/e/index.html
FEATURES             Qualifiers
     source          /culture_collection="NBRC:100138"
                     /db_xref="taxon:272557"
                     /focus
                     /mol_type="genomic DNA"
                     /note="strain coidentity: NBRC 100138"
                     /organism="Aeropyrum pernix K1"
                     /strain="K1"
     source          /db_xref="taxon:1032474"
                     /mol_type="genomic DNA"
                     /organism="Aeropyrum pernix ovoid virus 1"
                     /proviral
     source          /db_xref="taxon:1032473"
                     /mol_type="genomic DNA"
                     /organism="Aeropyrum pernix spindle-shaped virus 1"
                     /proviral
     protein         /EC_number="2.7.7.6"
                     /experiment="proteome analysis"
                     /gene="rpoA1"
                     /locus_tag="APE_1853.1"
                     /old_locus_tag="APE1853"
                     /transl_table=11
BEGIN
        1 MSLRLSEFRE TNLLDKILFG VLSPHEIRQL AKVTVVRGDL YEADGTPVSG GLRDPHFGAI
       61 EPGERCPVCG NSREECPGHF GKIELARPVL IPHYTDYVYK ILQATCRVCG RITLPEEKIK
      121 YYRLIFRRLR GKWPQLAKTF ATMVVKEAAQ ATQCPHCGKP QYKVVYIRPF HFYEKKPEGD
      181 VKLTPSEIRE RLEKTGSEIE ILGVHPERSR PEWMVATVLI VPPLAVRPSI TLETGLRSED
      241 DLTHALAEIV RQNEKLRNVI VTNAPETLIE ENWMVLQEMV AAYIDNELPG ARRLTHRRKR
      301 YLKTLAQRLK GKDGRIRGNL SGKRVNYSAR TVISPDPYIS INEVGVPEEI AKTLTIAMRV
      361 TPYNLEEARR YVLNGPDKWP GALFVYKASE RKKYDLRFFK DYEKLAESLE PGDVVERHLI
      421 NGDIVLFNRQ PSLHRMSIMG HIVRVMPGKT FRLNLLVCPP YNADFDGDEM NLHVPRLEEA
      481 QAEAREIMLV EKHILTPRYG GPIIGGRQDY VSGAYLLTVK TRLFTKEEVE RLLSVAGYKG
      541 DLPEPAILKP EPLWTGKQLA SIFLPEDLSF KGKSKTNAGD LACSDELCLH DSYIVITNGK
      601 LLEGVLDKKA IGAEEPNNLL HIIALEYGNS KARQLLDSFY RMFIRMLELR GLTISLHDID
      661 LPDRAKQEIE ELIREYKGRV YSIIEEYRKG TLEPIPGRSL EESLEIKIME VLDELRKRVQ
      721 EVASNNLDPF NDVFVMARTG ARGSDVNISQ MAAMLGQQAV RGRRIRRGLR NRVLAHFKEN
      781 DIEPEAWGFV RSSFRKGLRP TEVFFHAAAG REGLVDTAVK TSQSGYMQRR LINALQDIVV
      841 TYDGTVRDLY GNLIQLKYGE DGVDPMKTYH GKPVDVKRII QRVKASKAET V
//