LOCUS BAA80857.2 891 aa PRT BCT 07-OCT-2016 DEFINITION Aeropyrum pernix K1 DNA-directed RNA polymerase subunit A protein. ACCESSION BA000002-1215 PROTEIN_ID BAA80857.2 SOURCE Aeropyrum pernix K1 ORGANISM Aeropyrum pernix K1 Archaea; Thermoproteota; Thermoprotei; Desulfurococcales; Desulfurococcaceae; Aeropyrum. REFERENCE 1 (bases 1 to 1669696) AUTHORS Tanaka,T., Hino,Y., Kawarabayasi,Y., Kikuchi,H., Tajima,T., Sekigawa,T., Oguchi,A., Yamazaki,S., Tanikawa,S., Fujita,N. and Harayama,S. TITLE Direct Submission JOURNAL Submitted (14-DEC-1998) to the DDBJ/EMBL/GenBank databases. Contact:Director-General of Department of Biotechnology National Institute of Technology and Evaluation (NITE), NITE Genome Analysis Center (NGAC), Department of Biotechnology; 2-49-10 Nishihara, Shibuya-ku, Tokyo 151-0066, Japan URL :http://www.bio.nite.go.jp/ REFERENCE 2 AUTHORS Kawarabayasi,Y., Hino,Y., Horikawa,H., Yamazaki,S., Haikawa,Y., Jin-no,K., Takahashi,M., Sekine,M., Baba,S., Ankai,A., Kosugi,H., Hosoyama,A., Fukui,S., Nagai,Y., Nishijima,K., Nakazawa,H., Takamiya,M., Masuda,S., Funahashi,T., Tanaka,T., Kudoh,Y., Yamazaki,J., Kushida,N., Oguchi,A., Aoki,K., Kubota,K., Nakamura,Y., Nomura,N., Sako,Y. and Kikuchi,H. TITLE Complete Genome Sequence of an Aerobic Hyper-thermophilic Crenarchaeon, Aeropyrum pernix K1. JOURNAL DNA Res. 6, 83-101 (1999) REFERENCE 3 AUTHORS Yamazaki,S., Kikuchi,H. and Kawarabayasi,Y. TITLE Characterization of a Whole Set of tRNA Molecules in an Aerobic Hyper-thermophilic Crenarchaeon, Aeropyrum pernix K1 JOURNAL DNA Res. 12, 403-416 (2005) REFERENCE 4 AUTHORS Yamazaki,S., Yamazaki,J., Nishijima,K., Otsuka,R., Mise,M., Ishikawa,H., Sasaki,K., Tago,S. and Isono,K. TITLE Proteome Analysis of an Aerobic Hyperthermophilic Crenarchaeon, Aeropyrum pernix K1 JOURNAL Mol. Cell Proteomics 5, 811-823 (2006) COMMENT Kawarabayasi, Y. is at National Institute of Advanced Industrial Science and Technology (AIST), Tsukuba, Ibaraki 305-8566, Japan. Tanaka, T., Hino, Y., Kawarabayasi, Y. and Kikuchi, H. are original submitters. Tajima, T., Sekigawa, T., Oguchi, A., Yamazaki, S., Tanikawa, S., Fujita, N. and Harayama S. submitted a revised version of the genomic sequence with a single bp insertion and the result of reannotation. The genome of A. pernix was completely re-annotated in May 2006. Single nucleotide was inserted at position 941,216. Some ORFs were added or modified according to the result of proteome analysis at NITE (Yamazaki, S. et al., Mol Cell Proteomics. 5, 811-823 (2006)). The detailed process of re-annotation is described in http://www.bio.nite.go.jp/dogan/GeneralFeature?GENOME_ID=ape_G1. All locus tags of A. pernix were replaced to new identifiers by the following rules. 1. Prefix 'APE' or 'APES' was replaced by 'APE_'. 2. ORF numbers were inherited except for those with previous locus tag starting with 'APES'. 3. An alphabetical character like 'a' was added after the ORF number where new ORF was inserted between existing ORFs, including those with previous locus tag starting with 'APES'. 4. Version number like '.1' was added where the start position of existing ORF was changed. Please visit our web site. URL:http://www.bio.nite.go.jp/e/ DOGAN ; Database of the Genomes Analyzed at NITE The database contains genome sequence data, physical maps and the genomic and proteomic data of the microorganisms analyzed. URL:http://www.bio.nite.go.jp/dogan/Top The microbial strain and microbial genomic DNA clones used for the sequencing project are available through the NBRC. URL:http://www.nbrc.nite.go.jp/e/index.html FEATURES Qualifiers source /culture_collection="NBRC:100138" /db_xref="taxon:272557" /focus /mol_type="genomic DNA" /note="strain coidentity: NBRC 100138" /organism="Aeropyrum pernix K1" /strain="K1" source /db_xref="taxon:1032474" /mol_type="genomic DNA" /organism="Aeropyrum pernix ovoid virus 1" /proviral source /db_xref="taxon:1032473" /mol_type="genomic DNA" /organism="Aeropyrum pernix spindle-shaped virus 1" /proviral protein /EC_number="2.7.7.6" /experiment="proteome analysis" /gene="rpoA1" /locus_tag="APE_1853.1" /old_locus_tag="APE1853" /transl_table=11 BEGIN 1 MSLRLSEFRE TNLLDKILFG VLSPHEIRQL AKVTVVRGDL YEADGTPVSG GLRDPHFGAI 61 EPGERCPVCG NSREECPGHF GKIELARPVL IPHYTDYVYK ILQATCRVCG RITLPEEKIK 121 YYRLIFRRLR GKWPQLAKTF ATMVVKEAAQ ATQCPHCGKP QYKVVYIRPF HFYEKKPEGD 181 VKLTPSEIRE RLEKTGSEIE ILGVHPERSR PEWMVATVLI VPPLAVRPSI TLETGLRSED 241 DLTHALAEIV RQNEKLRNVI VTNAPETLIE ENWMVLQEMV AAYIDNELPG ARRLTHRRKR 301 YLKTLAQRLK GKDGRIRGNL SGKRVNYSAR TVISPDPYIS INEVGVPEEI AKTLTIAMRV 361 TPYNLEEARR YVLNGPDKWP GALFVYKASE RKKYDLRFFK DYEKLAESLE PGDVVERHLI 421 NGDIVLFNRQ PSLHRMSIMG HIVRVMPGKT FRLNLLVCPP YNADFDGDEM NLHVPRLEEA 481 QAEAREIMLV EKHILTPRYG GPIIGGRQDY VSGAYLLTVK TRLFTKEEVE RLLSVAGYKG 541 DLPEPAILKP EPLWTGKQLA SIFLPEDLSF KGKSKTNAGD LACSDELCLH DSYIVITNGK 601 LLEGVLDKKA IGAEEPNNLL HIIALEYGNS KARQLLDSFY RMFIRMLELR GLTISLHDID 661 LPDRAKQEIE ELIREYKGRV YSIIEEYRKG TLEPIPGRSL EESLEIKIME VLDELRKRVQ 721 EVASNNLDPF NDVFVMARTG ARGSDVNISQ MAAMLGQQAV RGRRIRRGLR NRVLAHFKEN 781 DIEPEAWGFV RSSFRKGLRP TEVFFHAAAG REGLVDTAVK TSQSGYMQRR LINALQDIVV 841 TYDGTVRDLY GNLIQLKYGE DGVDPMKTYH GKPVDVKRII QRVKASKAET V //