LOCUS BAA79020.1 919 aa PRT BCT 07-OCT-2016 DEFINITION Aeropyrum pernix K1 DNA double-strand break repair rad50 ATPase protein. ACCESSION BA000002-73 PROTEIN_ID BAA79020.1 SOURCE Aeropyrum pernix K1 ORGANISM Aeropyrum pernix K1 Archaea; Thermoproteota; Thermoprotei; Desulfurococcales; Desulfurococcaceae; Aeropyrum. REFERENCE 1 (bases 1 to 1669696) AUTHORS Tanaka,T., Hino,Y., Kawarabayasi,Y., Kikuchi,H., Tajima,T., Sekigawa,T., Oguchi,A., Yamazaki,S., Tanikawa,S., Fujita,N. and Harayama,S. TITLE Direct Submission JOURNAL Submitted (14-DEC-1998) to the DDBJ/EMBL/GenBank databases. Contact:Director-General of Department of Biotechnology National Institute of Technology and Evaluation (NITE), NITE Genome Analysis Center (NGAC), Department of Biotechnology; 2-49-10 Nishihara, Shibuya-ku, Tokyo 151-0066, Japan URL :http://www.bio.nite.go.jp/ REFERENCE 2 AUTHORS Kawarabayasi,Y., Hino,Y., Horikawa,H., Yamazaki,S., Haikawa,Y., Jin-no,K., Takahashi,M., Sekine,M., Baba,S., Ankai,A., Kosugi,H., Hosoyama,A., Fukui,S., Nagai,Y., Nishijima,K., Nakazawa,H., Takamiya,M., Masuda,S., Funahashi,T., Tanaka,T., Kudoh,Y., Yamazaki,J., Kushida,N., Oguchi,A., Aoki,K., Kubota,K., Nakamura,Y., Nomura,N., Sako,Y. and Kikuchi,H. TITLE Complete Genome Sequence of an Aerobic Hyper-thermophilic Crenarchaeon, Aeropyrum pernix K1. JOURNAL DNA Res. 6, 83-101 (1999) REFERENCE 3 AUTHORS Yamazaki,S., Kikuchi,H. and Kawarabayasi,Y. TITLE Characterization of a Whole Set of tRNA Molecules in an Aerobic Hyper-thermophilic Crenarchaeon, Aeropyrum pernix K1 JOURNAL DNA Res. 12, 403-416 (2005) REFERENCE 4 AUTHORS Yamazaki,S., Yamazaki,J., Nishijima,K., Otsuka,R., Mise,M., Ishikawa,H., Sasaki,K., Tago,S. and Isono,K. TITLE Proteome Analysis of an Aerobic Hyperthermophilic Crenarchaeon, Aeropyrum pernix K1 JOURNAL Mol. Cell Proteomics 5, 811-823 (2006) COMMENT Kawarabayasi, Y. is at National Institute of Advanced Industrial Science and Technology (AIST), Tsukuba, Ibaraki 305-8566, Japan. Tanaka, T., Hino, Y., Kawarabayasi, Y. and Kikuchi, H. are original submitters. Tajima, T., Sekigawa, T., Oguchi, A., Yamazaki, S., Tanikawa, S., Fujita, N. and Harayama S. submitted a revised version of the genomic sequence with a single bp insertion and the result of reannotation. The genome of A. pernix was completely re-annotated in May 2006. Single nucleotide was inserted at position 941,216. Some ORFs were added or modified according to the result of proteome analysis at NITE (Yamazaki, S. et al., Mol Cell Proteomics. 5, 811-823 (2006)). The detailed process of re-annotation is described in http://www.bio.nite.go.jp/dogan/GeneralFeature?GENOME_ID=ape_G1. All locus tags of A. pernix were replaced to new identifiers by the following rules. 1. Prefix 'APE' or 'APES' was replaced by 'APE_'. 2. ORF numbers were inherited except for those with previous locus tag starting with 'APES'. 3. An alphabetical character like 'a' was added after the ORF number where new ORF was inserted between existing ORFs, including those with previous locus tag starting with 'APES'. 4. Version number like '.1' was added where the start position of existing ORF was changed. Please visit our web site. URL:http://www.bio.nite.go.jp/e/ DOGAN ; Database of the Genomes Analyzed at NITE The database contains genome sequence data, physical maps and the genomic and proteomic data of the microorganisms analyzed. URL:http://www.bio.nite.go.jp/dogan/Top The microbial strain and microbial genomic DNA clones used for the sequencing project are available through the NBRC. URL:http://www.nbrc.nite.go.jp/e/index.html FEATURES Qualifiers source /culture_collection="NBRC:100138" /db_xref="taxon:272557" /focus /mol_type="genomic DNA" /note="strain coidentity: NBRC 100138" /organism="Aeropyrum pernix K1" /strain="K1" protein /experiment="proteome analysis" /locus_tag="APE_0110" /old_locus_tag="APE0110" /transl_table=11 BEGIN 1 MYVLKRLELR NIMSHFNTSI DFREGFTAIV GRNGAGKSTI LEAILFSITP HQAPRRSSMI 61 SENSSRGEIY LALQSSEGRL LELRNKLIRR GGGTNTEAAI ITLEGRRIAS KPTGYKEEIH 121 KILGLRGLPN PASYIEKAII ISQGGLQTLA EILSEPKELR DLLDAALGYA LLKQAISNIG 181 DVVLGVSPDG SPVKLGSKSI TRLQSGYMTL RNEVLGVDRE IREASKRLEE LEREREELER 241 RARDLESEAK ALQSEIGKLE TMEEMLVNVT SMIRSERSKL DTINTRLRYA ESKISSIDDL 301 EKRRAELRAK ASLAHEVAEL ARLQSRLDKL GRDLEMIRDA VEKLEVSRRL KEIESARREA 361 ENRLLEARSS IKEEQRRYTL LDYRVTRGRS IVTNIRRVLS ECRSKDLCGS EKPESVLERL 421 DAVINDLESK ARALDQEASA LEAEARRLVQ ALSMLEESGG SARCPVCGAE LPPGRAEAIA 481 RHYRHEAERL RKAAKEKAAE AEKARAEASR LQDKRRRIEL LLSRLNQLEE GLRELGFQTP 541 EDLAKAEQKL RMLRERLEEL RKLENSLEEK VRNLSREEVA LREAKTRALE VLQRLGIKEE 601 EAREKLKTLS SESKKLERML VSKAEDLATR LGITAYRSLD DLLEKAREAL EGVDKELSAI 661 ERRLEEARRL KEEAAKLKWE AEQVMKRLEE LEAEEKKLRK EVSRKSEIEA RLKEVQNTLA 721 ELDDRISRID REMGELQTRI REMKSRKASG EEALKLYLPA AASRRIMEEI GEIAYRRLLA 781 VLEDEMNDIL SRFNLDVAGV EIREKAAREI EVKAIGGNGA YRPLEAVSGG ERTVLALSFV 841 LALNKAVGGK LGFLALDEPT ANLDEDRRRS LVEVLRGISV EGLVRQLVVV THHEDVRDYA 901 DTICLVTRTQ QGSRVECTY //