LOCUS       BAA30194.1              1044 aa    PRT              BCT 10-MAY-2017
DEFINITION  Pyrococcus horikoshii OT3 1044aa long hypothetical translation
            initiation factor IF-2 protein.
ACCESSION   BA000001-1126
PROTEIN_ID  BAA30194.1
SOURCE      Pyrococcus horikoshii OT3
  ORGANISM  Pyrococcus horikoshii OT3
            Archaea; Euryarchaeota; Thermococci; Thermococcales;
            Thermococcaceae; Pyrococcus.
REFERENCE   1  (bases 1 to 1738505)
  AUTHORS   Tanaka,T., Kawarabayasi,Y. and Kikuchi,H.
  TITLE     Direct Submission
  JOURNAL   Submitted (11-JUN-1998) to the DDBJ/EMBL/GenBank databases.
            Contact:Director-General of Biotechnology Center
            National Institute of Technology and Evaluation, Biotechnology
            Center; 2-49-10 Nishihara, Shibuyaku, Tokyo 151-0066, Japan
REFERENCE   2
  AUTHORS   Kawarabayasi,Y., Sawada,M., Horikawa,H., Haikawa,Y., Hino,Y.,
            Yamamoto,S., Sekine,M., Baba,S., Kosugi,H., Hosoyama,A., Nagai,Y.,
            Sakai,M., Ogura,K., Otuka,R., Nakazawa,H., Takamiya,M., Ohfuku,Y.,
            Funahashi,T., Tanaka,T., Kudoh,Y., Yamazaki,J., Kushida,N.,
            Oguchi,A., Aoki,K., Nakamura,Y., Robb,T.F., Horikoshi,K.,
            Masuchi,Y., Shizuya,H. and Kikuchi,H.
  TITLE     Complete Sequence and Gene Organization of the Genome of a
            Hyper-thermophilic Archaebacterium, Pyrococcus horikoshii OT3
  JOURNAL   DNA Res. 5, 55-76 (1998)
COMMENT     Kawarabayasi, Y. is officially affiliated with the National
            Institute of Bioscience and Human-Technology, Tsukuba, Ibaraki
            305-0046, Japan.
            Robb, T. F. is at the Center of Marine Biotechnology, University
            of Maryland, Baltimore, MD, USA.
            Horikoshi, K. is at the Japan Marine Science and Technology
            Center, Yokosuka, Kanagawa 237-0061, Japan.
            Masuchi, Y. is at the University of Tokyo, Meguro, Tokyo 153-0041,
            Japan.
            Shizuya, H. is at the California Institute of Technology,
            Pasadena, CA, USA.
            The other authors are at the National Institute of Technology and
            Evaluation, 2-49-10 Nishihara, Shibuya, Tokyo 151-0066, Japan.
            All the sequence with length 100 codons or more between ATG or GTG
            and stop codon are defined as CDS
            Homology analysis is performed by Smith-Waterman algorithm against
            GenBank and GenPept release 103; EMBL release 52.0; SwissProt
            release 34.0; PIR-Protein release 54.0; and OWL release 29.5.
            E-mail address for comments and questions: genomeOT3@nite.go.jp
            Restriction map, ORF organization, sequence alignment and more
            information are available at W.W.W. site of Biotechnology Center,
            URL: http://www.bio.nite.go.jp/
FEATURES             Qualifiers
     source          /db_xref="taxon:70601"
                     /mol_type="genomic DNA"
                     /organism="Pyrococcus horikoshii OT3"
                     /strain="OT3"
     protein         /gene="PH1095"
                     /note="similar to PIR:G64332 percent identity: 51.320 in
                     1143aa; owl:SAU43413 percent identity: 49.699 in 506aa;
                     Swiss_Prot:Q10251 percent identity: 40.795 in 487aa.
                     motif=mitochondrial energy transfer proteins signature ;
                     protein splicing signature"
                     /transl_table=11
BEGIN
        1 MSYVKRIRQP IIAVLGHVDH GKCLLPEERV ILPDYGPITL EELFNMTKET VFKDEEKEVR
       61 KLGIRMPVAG VDGRVRLLEG PYVWKVRYKG KMLRVKLKDW HSVAVTPEHP FLTTRGWVRA
      121 DQLKPGDYVA VPKILPGKDD KEKFLQYVHE KLKGKVHIKL PSSDEEWETF FYFAGTIFGR
      181 ENSVNPEGLT HEVKALLELF KVLFEYPREV LRVLFMAPVR YVANFLRGFF DINGYVNGEE
      241 LRVEVRGAPH EVLEELSLIL LRLGIVSKIY PTSLAISGRR NLELFRRYIG FSEKQKAKEL
      301 EGIIRRSENS ESYPIFEELR RIRLLFGFTR AELSSTIPLY SKYESKEAPS YEILMKILNT
      361 IEKGSKDLNK KITILEGRVR DHEYIEEFKR EGLIKDGKLT ELGKELLEVW RNREFDSRDV
      421 NYLRNIIENF VFLPVEKIEE FEYDGYVYDV TTETHNFIAN GILVHNTTLL DKIRKTNVAA
      481 KEAGGITQHI GATEVPIDVV KKIAGPLIKL WKAEIRLPGL LFIDTPGHEA FTSLRARGGS
      541 LADLAVLVID VNEGFQPQTI ESIEILRRYR TPFVVAANKI DRIRGWVIEE DEPFLMNIKR
      601 QDQRAIQELE TKLWELIGKF YEFGFQANRF DRVQNFTREL AIVPISAKYG IGIAELLVLI
      661 AGLSQKYLEE KLKIEVEGPA RGTILEVREE PGLGHTIDVI IYDGTLHKDD TIVVGGKDKA
      721 IVTKVRALLK PKPLDEIRDP RFRFDYVDEV TAAAGVKIAA PGLEEALAGS PVIAAPTPED
      781 VERAKEEIMR QIESVVISTD KVGVIVKADT LGSLEALSKE LQEKEIPIRK ADVGNISKTD
      841 VMEALSVKEE NPKYGVILGF NVKVNEDAKE VAKAKEVPIF VGNIIYKLIE DYEAWIKEEE
      901 EKRKRELLAK VTFPGVIKLY PDERYVFRRS NPAIVGIEVL EGRIKPGVTL IKQNGQKVGT
      961 IRSIKSRDEF LQEARKGQAV AIAIEGAIVG RHIHPGETLY VDLSRDDAII LLKHLRDVLE
     1021 DTDIKALKMI AQVKAKEDPF WRAV
//