LOCUS BAA30194.1 1044 aa PRT BCT 10-MAY-2017 DEFINITION Pyrococcus horikoshii OT3 1044aa long hypothetical translation initiation factor IF-2 protein. ACCESSION BA000001-1126 PROTEIN_ID BAA30194.1 SOURCE Pyrococcus horikoshii OT3 ORGANISM Pyrococcus horikoshii OT3 Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Pyrococcus. REFERENCE 1 (bases 1 to 1738505) AUTHORS Tanaka,T., Kawarabayasi,Y. and Kikuchi,H. TITLE Direct Submission JOURNAL Submitted (11-JUN-1998) to the DDBJ/EMBL/GenBank databases. Contact:Director-General of Biotechnology Center National Institute of Technology and Evaluation, Biotechnology Center; 2-49-10 Nishihara, Shibuyaku, Tokyo 151-0066, Japan REFERENCE 2 AUTHORS Kawarabayasi,Y., Sawada,M., Horikawa,H., Haikawa,Y., Hino,Y., Yamamoto,S., Sekine,M., Baba,S., Kosugi,H., Hosoyama,A., Nagai,Y., Sakai,M., Ogura,K., Otuka,R., Nakazawa,H., Takamiya,M., Ohfuku,Y., Funahashi,T., Tanaka,T., Kudoh,Y., Yamazaki,J., Kushida,N., Oguchi,A., Aoki,K., Nakamura,Y., Robb,T.F., Horikoshi,K., Masuchi,Y., Shizuya,H. and Kikuchi,H. TITLE Complete Sequence and Gene Organization of the Genome of a Hyper-thermophilic Archaebacterium, Pyrococcus horikoshii OT3 JOURNAL DNA Res. 5, 55-76 (1998) COMMENT Kawarabayasi, Y. is officially affiliated with the National Institute of Bioscience and Human-Technology, Tsukuba, Ibaraki 305-0046, Japan. Robb, T. F. is at the Center of Marine Biotechnology, University of Maryland, Baltimore, MD, USA. Horikoshi, K. is at the Japan Marine Science and Technology Center, Yokosuka, Kanagawa 237-0061, Japan. Masuchi, Y. is at the University of Tokyo, Meguro, Tokyo 153-0041, Japan. Shizuya, H. is at the California Institute of Technology, Pasadena, CA, USA. The other authors are at the National Institute of Technology and Evaluation, 2-49-10 Nishihara, Shibuya, Tokyo 151-0066, Japan. All the sequence with length 100 codons or more between ATG or GTG and stop codon are defined as CDS Homology analysis is performed by Smith-Waterman algorithm against GenBank and GenPept release 103; EMBL release 52.0; SwissProt release 34.0; PIR-Protein release 54.0; and OWL release 29.5. E-mail address for comments and questions: genomeOT3@nite.go.jp Restriction map, ORF organization, sequence alignment and more information are available at W.W.W. site of Biotechnology Center, URL: http://www.bio.nite.go.jp/ FEATURES Qualifiers source /db_xref="taxon:70601" /mol_type="genomic DNA" /organism="Pyrococcus horikoshii OT3" /strain="OT3" protein /gene="PH1095" /note="similar to PIR:G64332 percent identity: 51.320 in 1143aa; owl:SAU43413 percent identity: 49.699 in 506aa; Swiss_Prot:Q10251 percent identity: 40.795 in 487aa. motif=mitochondrial energy transfer proteins signature ; protein splicing signature" /transl_table=11 BEGIN 1 MSYVKRIRQP IIAVLGHVDH GKCLLPEERV ILPDYGPITL EELFNMTKET VFKDEEKEVR 61 KLGIRMPVAG VDGRVRLLEG PYVWKVRYKG KMLRVKLKDW HSVAVTPEHP FLTTRGWVRA 121 DQLKPGDYVA VPKILPGKDD KEKFLQYVHE KLKGKVHIKL PSSDEEWETF FYFAGTIFGR 181 ENSVNPEGLT HEVKALLELF KVLFEYPREV LRVLFMAPVR YVANFLRGFF DINGYVNGEE 241 LRVEVRGAPH EVLEELSLIL LRLGIVSKIY PTSLAISGRR NLELFRRYIG FSEKQKAKEL 301 EGIIRRSENS ESYPIFEELR RIRLLFGFTR AELSSTIPLY SKYESKEAPS YEILMKILNT 361 IEKGSKDLNK KITILEGRVR DHEYIEEFKR EGLIKDGKLT ELGKELLEVW RNREFDSRDV 421 NYLRNIIENF VFLPVEKIEE FEYDGYVYDV TTETHNFIAN GILVHNTTLL DKIRKTNVAA 481 KEAGGITQHI GATEVPIDVV KKIAGPLIKL WKAEIRLPGL LFIDTPGHEA FTSLRARGGS 541 LADLAVLVID VNEGFQPQTI ESIEILRRYR TPFVVAANKI DRIRGWVIEE DEPFLMNIKR 601 QDQRAIQELE TKLWELIGKF YEFGFQANRF DRVQNFTREL AIVPISAKYG IGIAELLVLI 661 AGLSQKYLEE KLKIEVEGPA RGTILEVREE PGLGHTIDVI IYDGTLHKDD TIVVGGKDKA 721 IVTKVRALLK PKPLDEIRDP RFRFDYVDEV TAAAGVKIAA PGLEEALAGS PVIAAPTPED 781 VERAKEEIMR QIESVVISTD KVGVIVKADT LGSLEALSKE LQEKEIPIRK ADVGNISKTD 841 VMEALSVKEE NPKYGVILGF NVKVNEDAKE VAKAKEVPIF VGNIIYKLIE DYEAWIKEEE 901 EKRKRELLAK VTFPGVIKLY PDERYVFRRS NPAIVGIEVL EGRIKPGVTL IKQNGQKVGT 961 IRSIKSRDEF LQEARKGQAV AIAIEGAIVG RHIHPGETLY VDLSRDDAII LLKHLRDVLE 1021 DTDIKALKMI AQVKAKEDPF WRAV //