LOCUS AZN93000.1 485 aa PRT BCT 18-DEC-2018 DEFINITION Pseudomonas aeruginosa purine permease protein. ACCESSION CP032541-3097 PROTEIN_ID AZN93000.1 SOURCE Pseudomonas aeruginosa ORGANISM Pseudomonas aeruginosa Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas. REFERENCE 1 (bases 1 to 6264451) AUTHORS Valentine,M., Withers,R.W., Johnson,S.L., Niles,R. and Yu,H. TITLE Attenuated P. aeruginosa strain PAO1 with in-frame deletion of the following genes: toxA, plcH, phzM, wapR, and aroA JOURNAL Unpublished REFERENCE 2 (bases 1 to 6264451) AUTHORS Valentine,M., Withers,R.W., Johnson,S.L., Niles,R. and Yu,H. TITLE Direct Submission JOURNAL Submitted (25-SEP-2018) BioScience, Los Alamos National Laboratory, PO Box 1663 M888, Los Alamos, NM 87545, USA COMMENT Bacteria and source DNA available from Dr. Hongwei Yu. Annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (released 2013). Information about the Pipeline can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 20-SEP-2018 Assembly Method :: Bowtie2 v. 2018-09-20 Assembly Name :: PGN5 Genome Representation :: Full Expected Final Version :: Yes Reference-guided Assembly :: NC_002516.2 Genome Coverage :: 217.64x Sequencing Technology :: Illumina NextSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Date :: 09/26/2018 16:28:44 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline Annotation Method :: Best-placed reference protein set; GeneMarkS+ Annotation Software revision :: 4.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA; repeat_region Genes (total) :: 5,903 CDS (total) :: 5,840 Genes (coding) :: 5,779 CDS (coding) :: 5,779 Genes (RNA) :: 63 rRNAs :: 4 (5S) complete rRNAs :: 4 (5S) tRNAs :: 55 ncRNAs :: 4 Pseudo Genes (total) :: 61 Pseudo Genes (ambiguous residues) :: 12 of 61 Pseudo Genes (frameshifted) :: 22 of 61 Pseudo Genes (incomplete) :: 18 of 61 Pseudo Genes (internal stop) :: 13 of 61 Pseudo Genes (multiple problems) :: 4 of 61 ##Genome-Annotation-Data-END## FEATURES Qualifiers source /organism="Pseudomonas aeruginosa" /mol_type="genomic DNA" /strain="PGN5" /db_xref="taxon:287" /country="USA: WV, Huntington" /collection_date="21-Nov-2017" /collected_by="Progenesis Technologies, LLC" /identified_by="Progenesis Technologies, LLC" /note="genotype: PAO1 toxA-, plcH-, phzM-, wapR-, aroA-" protein /locus_tag="PGN5_15620" /inference="COORDINATES: similar to AA sequence:RefSeq:NP_251628.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /transl_table=11 BEGIN 1 MAYGLQHVLT MYGGIVAVPL ILGQAAGLAP GDIGLLIAAS LFAGGLATLL QTLGVPFFGC 61 QLPLVQGVSF AGVATMVAII GSGGSGGIPA VLGAVMAASL IGLLITPIFS RITKFFPPLV 121 TGIVITTIGL TLMPVAARWA MGGNSHAPDF GSMANIGLAA ITLVIVLLLS KLGSASISRL 181 SILLAMVIGT VIAVFLGMAD FSKVTEGPLV AFPTPFHFGM PTFQVAAIIS MCIVIMVTLV 241 ETSADILAVG EIIDTKVDSR RLGNGLRADM FSSMLAPIFG SFTQSAFAQN VGLVAVTGIK 301 SRYVVATGGL FLVILGLLPV MGRVIAAVPT AVLGGAGIVL FGTVAASGIR TLSKVDYRNN 361 MNLIIVATSI GFGMIPIAAP TFYDHFPSWF ATIFHSGISS SAIMAILLNL AFNHFTAGNS 421 DQQSVFVAAS ERTLRYQDIA ALHEGDYFLD GKLYDAQGNE VPLAGDDSHG APPRRRSETA 481 EAGSA //