LOCUS AZN91968.1 653 aa PRT BCT 18-DEC-2018 DEFINITION Pseudomonas aeruginosa TonB-dependent receptor protein. ACCESSION CP032541-2016 PROTEIN_ID AZN91968.1 SOURCE Pseudomonas aeruginosa ORGANISM Pseudomonas aeruginosa Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas. REFERENCE 1 (bases 1 to 6264451) AUTHORS Valentine,M., Withers,R.W., Johnson,S.L., Niles,R. and Yu,H. TITLE Attenuated P. aeruginosa strain PAO1 with in-frame deletion of the following genes: toxA, plcH, phzM, wapR, and aroA JOURNAL Unpublished REFERENCE 2 (bases 1 to 6264451) AUTHORS Valentine,M., Withers,R.W., Johnson,S.L., Niles,R. and Yu,H. TITLE Direct Submission JOURNAL Submitted (25-SEP-2018) BioScience, Los Alamos National Laboratory, PO Box 1663 M888, Los Alamos, NM 87545, USA COMMENT Bacteria and source DNA available from Dr. Hongwei Yu. Annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (released 2013). Information about the Pipeline can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 20-SEP-2018 Assembly Method :: Bowtie2 v. 2018-09-20 Assembly Name :: PGN5 Genome Representation :: Full Expected Final Version :: Yes Reference-guided Assembly :: NC_002516.2 Genome Coverage :: 217.64x Sequencing Technology :: Illumina NextSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Date :: 09/26/2018 16:28:44 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline Annotation Method :: Best-placed reference protein set; GeneMarkS+ Annotation Software revision :: 4.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA; repeat_region Genes (total) :: 5,903 CDS (total) :: 5,840 Genes (coding) :: 5,779 CDS (coding) :: 5,779 Genes (RNA) :: 63 rRNAs :: 4 (5S) complete rRNAs :: 4 (5S) tRNAs :: 55 ncRNAs :: 4 Pseudo Genes (total) :: 61 Pseudo Genes (ambiguous residues) :: 12 of 61 Pseudo Genes (frameshifted) :: 22 of 61 Pseudo Genes (incomplete) :: 18 of 61 Pseudo Genes (internal stop) :: 13 of 61 Pseudo Genes (multiple problems) :: 4 of 61 ##Genome-Annotation-Data-END## FEATURES Qualifiers source /organism="Pseudomonas aeruginosa" /mol_type="genomic DNA" /strain="PGN5" /db_xref="taxon:287" /country="USA: WV, Huntington" /collection_date="21-Nov-2017" /collected_by="Progenesis Technologies, LLC" /identified_by="Progenesis Technologies, LLC" /note="genotype: PAO1 toxA-, plcH-, phzM-, wapR-, aroA-" protein /locus_tag="PGN5_10165" /inference="COORDINATES: similar to AA sequence:RefSeq:NP_250612.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /transl_table=11 BEGIN 1 MTPHSSPHRL PPLRLARAVP FLYLLPCLAL AAPVDLEPTV VSATTTERKL RDAPASVSLI 61 AAEDLRRRPV RDLQEALRGS ESLQFNGVGM SRRGISVRGM SSEHTLVLVD GQRISTSSGA 121 IAHSDFDLGW VPVESIERIE VVRGPMSSLY GSEALGGVVN VITRRATDTW TGSGLLDGGV 181 REDGLGGQSH QLGAYLAGPL VPGKLGLALN GESRRQQETP DADERRLSEL EGGNADSGGL 241 NLSWTPDDAQ RIDLGHQRGR ERRWRNSETG GPRSRYYESR DVIERERWSL AHNGQWDWGS 301 SQLRTYRNRL ERHNARSDGQ PPSNPQRLTD SVVDGHLSVP AFERHLFTLG GEWRKEELED 361 RSVNTAGDAS ARHKALFLQD EIAFGPDWSL TLGSRFDKHE AFGWESSPRL YLLHHLSDVL 421 TLRAGVGRGY KAPSLKQLSP EYAAVGGGGR FTIYGNPDLK PETNTSYELG ADYQGDGWSL 481 KGTVFENDVR DLIQTVCVAR CGVRGGEIRN YENVDRARIR GLELGGGVDL PADLRWELNY 541 TYLDARNRTA GQRLGDRSRH LANSQLRWSP NVRFSAQLRT EYVGSQVAYS SNVGYALPAY 601 SLWHLELSQK LSENLTLRGG IENLGDQRLA DDDTHFTYAE PGRTFHLGLV ASF //