LOCUS AZN91354.1 851 aa PRT BCT 18-DEC-2018 DEFINITION Pseudomonas aeruginosa TonB-dependent receptor protein. ACCESSION CP032541-1368 PROTEIN_ID AZN91354.1 SOURCE Pseudomonas aeruginosa ORGANISM Pseudomonas aeruginosa Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas. REFERENCE 1 (bases 1 to 6264451) AUTHORS Valentine,M., Withers,R.W., Johnson,S.L., Niles,R. and Yu,H. TITLE Attenuated P. aeruginosa strain PAO1 with in-frame deletion of the following genes: toxA, plcH, phzM, wapR, and aroA JOURNAL Unpublished REFERENCE 2 (bases 1 to 6264451) AUTHORS Valentine,M., Withers,R.W., Johnson,S.L., Niles,R. and Yu,H. TITLE Direct Submission JOURNAL Submitted (25-SEP-2018) BioScience, Los Alamos National Laboratory, PO Box 1663 M888, Los Alamos, NM 87545, USA COMMENT Bacteria and source DNA available from Dr. Hongwei Yu. Annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (released 2013). Information about the Pipeline can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 20-SEP-2018 Assembly Method :: Bowtie2 v. 2018-09-20 Assembly Name :: PGN5 Genome Representation :: Full Expected Final Version :: Yes Reference-guided Assembly :: NC_002516.2 Genome Coverage :: 217.64x Sequencing Technology :: Illumina NextSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Date :: 09/26/2018 16:28:44 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline Annotation Method :: Best-placed reference protein set; GeneMarkS+ Annotation Software revision :: 4.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA; repeat_region Genes (total) :: 5,903 CDS (total) :: 5,840 Genes (coding) :: 5,779 CDS (coding) :: 5,779 Genes (RNA) :: 63 rRNAs :: 4 (5S) complete rRNAs :: 4 (5S) tRNAs :: 55 ncRNAs :: 4 Pseudo Genes (total) :: 61 Pseudo Genes (ambiguous residues) :: 12 of 61 Pseudo Genes (frameshifted) :: 22 of 61 Pseudo Genes (incomplete) :: 18 of 61 Pseudo Genes (internal stop) :: 13 of 61 Pseudo Genes (multiple problems) :: 4 of 61 ##Genome-Annotation-Data-END## FEATURES Qualifiers source /organism="Pseudomonas aeruginosa" /mol_type="genomic DNA" /strain="PGN5" /db_xref="taxon:287" /country="USA: WV, Huntington" /collection_date="21-Nov-2017" /collected_by="Progenesis Technologies, LLC" /identified_by="Progenesis Technologies, LLC" /note="genotype: PAO1 toxA-, plcH-, phzM-, wapR-, aroA-" protein /locus_tag="PGN5_06895" /inference="COORDINATES: similar to AA sequence:RefSeq:NP_249993.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /transl_table=11 BEGIN 1 MTLPFTRAAW RPLCSAAVLG AALWAAGASA AERRFDLPAQ PLAASLSRLA QQAQVQVLFD 61 ESLLRGLRAP ALSGSYGVRE ALERLLVGSE LELVEAGGGY VVRRRQVDAY SDNALQLDAQ 121 TIVGNGREVD ASNVGRSTLT RRDIERQQAD NIPSLLQTLP GVTMGGSPKP GGQTTNIWGL 181 GDAEDVPYTL DGAQKSGFER YQQGTVFIEP EMIKRIEVEK GPHSVFTGNG GFGGTVHMET 241 KDAPDLLREG RDVGAMLKYG YHSNDQQKIY SGAVFGRSED RRVDALLYLN GRDGRDMKLA 301 DNLPLSPTDY PINPKRLPNS AQDEKTGLFK LNLHPTEEHD LGFTYLRSKS SRWTPFSASS 361 YPTPPSQWTI DRYGYELGLT RLLAHRDTTD TTWTGKYNYH PLDNPWIDLQ LSYSDARTEQ 421 LDRREDTAFY QLATGGKRMR TEYQDKVLEL RNTSRFDTGA LQHELTLGAA LHKHKRDILM 481 HMPGKTYETP RYNYGWLQPA FMPAGKQDTQ SFYIQDAITY GSLTVTPSMR FDSVRNDGQA 541 NLAPIYDNPK LGHDYRAQTY SGWSPRLSVF WTATPNLAFF ADYTETWRAP VIDEQYEVQN 601 SSTIGGSSRD LDAERIHAIR GGSVINLPDL LVAGDSLQIR TTLFQNRIKD EIFRTRSVGC 661 RQQSIDNGSI GGSCGDMLPL SNYRNLPGLT IKGFEIESFY DSQRLFGSLS YSWMTGKHDG 721 AYSNPWGPNV WARDIPPPKW VAMLGLKVPE WDAKLGWQGE FVRKTDRLPS DRYSGGMGTG 781 SGDIYWDHAA NDSYDTHRLF AEWVPAKLGL KDTRIDFTVD NLFNRSYRQP LGGDLVYSQG 841 RNAKISVTQF F //