LOCUS AZN91228.1 834 aa PRT BCT 18-DEC-2018 DEFINITION Pseudomonas aeruginosa nitrate reductase catalytic subunit NapA protein. ACCESSION CP032541-1235 PROTEIN_ID AZN91228.1 SOURCE Pseudomonas aeruginosa ORGANISM Pseudomonas aeruginosa Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas. REFERENCE 1 (bases 1 to 6264451) AUTHORS Valentine,M., Withers,R.W., Johnson,S.L., Niles,R. and Yu,H. TITLE Attenuated P. aeruginosa strain PAO1 with in-frame deletion of the following genes: toxA, plcH, phzM, wapR, and aroA JOURNAL Unpublished REFERENCE 2 (bases 1 to 6264451) AUTHORS Valentine,M., Withers,R.W., Johnson,S.L., Niles,R. and Yu,H. TITLE Direct Submission JOURNAL Submitted (25-SEP-2018) BioScience, Los Alamos National Laboratory, PO Box 1663 M888, Los Alamos, NM 87545, USA COMMENT Bacteria and source DNA available from Dr. Hongwei Yu. Annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (released 2013). Information about the Pipeline can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 20-SEP-2018 Assembly Method :: Bowtie2 v. 2018-09-20 Assembly Name :: PGN5 Genome Representation :: Full Expected Final Version :: Yes Reference-guided Assembly :: NC_002516.2 Genome Coverage :: 217.64x Sequencing Technology :: Illumina NextSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Date :: 09/26/2018 16:28:44 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline Annotation Method :: Best-placed reference protein set; GeneMarkS+ Annotation Software revision :: 4.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA; repeat_region Genes (total) :: 5,903 CDS (total) :: 5,840 Genes (coding) :: 5,779 CDS (coding) :: 5,779 Genes (RNA) :: 63 rRNAs :: 4 (5S) complete rRNAs :: 4 (5S) tRNAs :: 55 ncRNAs :: 4 Pseudo Genes (total) :: 61 Pseudo Genes (ambiguous residues) :: 12 of 61 Pseudo Genes (frameshifted) :: 22 of 61 Pseudo Genes (incomplete) :: 18 of 61 Pseudo Genes (internal stop) :: 13 of 61 Pseudo Genes (multiple problems) :: 4 of 61 ##Genome-Annotation-Data-END## FEATURES Qualifiers source /organism="Pseudomonas aeruginosa" /mol_type="genomic DNA" /strain="PGN5" /db_xref="taxon:287" /country="USA: WV, Huntington" /collection_date="21-Nov-2017" /collected_by="Progenesis Technologies, LLC" /identified_by="Progenesis Technologies, LLC" /note="genotype: PAO1 toxA-, plcH-, phzM-, wapR-, aroA-" protein /gene="napA" /locus_tag="PGN5_06230" /inference="COORDINATES: similar to AA sequence:RefSeq:WP_013792029.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /transl_table=11 BEGIN 1 MNLTRREFAK ANAAAIAAAA AGLPILVRAS NLVTEADVTS LVWNKAPCRF CGTGCSVMVA 61 TRDGQVVATH GDIKAEVNRG INCVKGYFLS KIMYGSDRLT RPLLRMKDGK FDKQGEFQPI 121 SWEQAFDIMA EKFKAALKAK GPESVGMFGS GQWTVWEGYA ANKLFKAGLR SNNIDPNARH 181 CMASAVMGFM RSFGMDEPMG CYDDIEATDS FVLWGSNMAE MHPVLWSRVT DRRLSAPQVK 241 VAVLSTFEHR SFELADLPMV FKPQTDLIIL NYIANHIIES GAVNRDFVER HVRFAHGAED 301 IGYGLRPDDP LEKKAKNADK ANTWSDIDFK AFAEFVKPYT LERTARESGV PAERLKALAE 361 LYADPKRKVV SFWTMGFNQH TRGVWANNLI YNIHLLTGKI SEPGNSPFSL TGQPSACGTA 421 REVGTFSHRL PADLVVTNPK HRETAEKIWK VPAGTIQEKV GFHAVQQSRM LKDGVLNVYW 481 TQVSNNMQAG PNVMQEVLPG WRNPDNFVIV SDVYPTVSAQ AADLILPSAM WVEKEGAFGN 541 AERRTQFWHQ LVKAPGEAKS DLWQLVEFSK RFTTDEVWPA ELLAKAPELK GKTLYDVLFR 601 NGQVDRFPAS DLAKGYANDE VDAFGFYIQK GLFEEYAAFG RGHGHDLAPF DAYHEARGLR 661 WPVVDGKETR WRYREGYDPY VSKGSGVQFY GYPDKKAIVF ALPYEPPAEA PDQDYPFWLA 721 TGRVLEHWHT GSMTARVPEL YKAVPDALVY MHPEDARQLK LRRGSEVKVV SRRGEIRARV 781 ETRGRNKPPQ GLVFVPFFDA NKLINKVTLD ATDPISKQTD YKKCAVRIEL LNLA //