LOCUS       AZN91228.1               834 aa    PRT              BCT 18-DEC-2018
DEFINITION  Pseudomonas aeruginosa nitrate reductase catalytic subunit
            NapA protein.
ACCESSION   CP032541-1235
PROTEIN_ID  AZN91228.1
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales;
            Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (bases 1 to 6264451)
  AUTHORS   Valentine,M., Withers,R.W., Johnson,S.L., Niles,R. and Yu,H.
  TITLE     Attenuated P. aeruginosa strain PAO1 with in-frame deletion of the
            following genes: toxA, plcH, phzM, wapR, and aroA
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 6264451)
  AUTHORS   Valentine,M., Withers,R.W., Johnson,S.L., Niles,R. and Yu,H.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-SEP-2018) BioScience, Los Alamos National Laboratory,
            PO Box 1663 M888, Los Alamos, NM 87545, USA
COMMENT     Bacteria and source DNA available from Dr. Hongwei Yu.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date             :: 20-SEP-2018
            Assembly Method           :: Bowtie2 v. 2018-09-20
            Assembly Name             :: PGN5
            Genome Representation     :: Full
            Expected Final Version    :: Yes
            Reference-guided Assembly :: NC_002516.2
            Genome Coverage           :: 217.64x
            Sequencing Technology     :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 09/26/2018 16:28:44
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 5,903
            CDS (total)                       :: 5,840
            Genes (coding)                    :: 5,779
            CDS (coding)                      :: 5,779
            Genes (RNA)                       :: 63
            rRNAs                             :: 4 (5S)
            complete rRNAs                    :: 4 (5S)
            tRNAs                             :: 55
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 61
            Pseudo Genes (ambiguous residues) :: 12 of 61
            Pseudo Genes (frameshifted)       :: 22 of 61
            Pseudo Genes (incomplete)         :: 18 of 61
            Pseudo Genes (internal stop)      :: 13 of 61
            Pseudo Genes (multiple problems)  :: 4 of 61
            ##Genome-Annotation-Data-END##
FEATURES             Qualifiers
     source          /organism="Pseudomonas aeruginosa"
                     /mol_type="genomic DNA"
                     /strain="PGN5"
                     /db_xref="taxon:287"
                     /country="USA: WV, Huntington"
                     /collection_date="21-Nov-2017"
                     /collected_by="Progenesis Technologies, LLC"
                     /identified_by="Progenesis Technologies, LLC"
                     /note="genotype: PAO1 toxA-, plcH-, phzM-, wapR-, aroA-"
     protein         /gene="napA"
                     /locus_tag="PGN5_06230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013792029.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /transl_table=11
BEGIN
        1 MNLTRREFAK ANAAAIAAAA AGLPILVRAS NLVTEADVTS LVWNKAPCRF CGTGCSVMVA
       61 TRDGQVVATH GDIKAEVNRG INCVKGYFLS KIMYGSDRLT RPLLRMKDGK FDKQGEFQPI
      121 SWEQAFDIMA EKFKAALKAK GPESVGMFGS GQWTVWEGYA ANKLFKAGLR SNNIDPNARH
      181 CMASAVMGFM RSFGMDEPMG CYDDIEATDS FVLWGSNMAE MHPVLWSRVT DRRLSAPQVK
      241 VAVLSTFEHR SFELADLPMV FKPQTDLIIL NYIANHIIES GAVNRDFVER HVRFAHGAED
      301 IGYGLRPDDP LEKKAKNADK ANTWSDIDFK AFAEFVKPYT LERTARESGV PAERLKALAE
      361 LYADPKRKVV SFWTMGFNQH TRGVWANNLI YNIHLLTGKI SEPGNSPFSL TGQPSACGTA
      421 REVGTFSHRL PADLVVTNPK HRETAEKIWK VPAGTIQEKV GFHAVQQSRM LKDGVLNVYW
      481 TQVSNNMQAG PNVMQEVLPG WRNPDNFVIV SDVYPTVSAQ AADLILPSAM WVEKEGAFGN
      541 AERRTQFWHQ LVKAPGEAKS DLWQLVEFSK RFTTDEVWPA ELLAKAPELK GKTLYDVLFR
      601 NGQVDRFPAS DLAKGYANDE VDAFGFYIQK GLFEEYAAFG RGHGHDLAPF DAYHEARGLR
      661 WPVVDGKETR WRYREGYDPY VSKGSGVQFY GYPDKKAIVF ALPYEPPAEA PDQDYPFWLA
      721 TGRVLEHWHT GSMTARVPEL YKAVPDALVY MHPEDARQLK LRRGSEVKVV SRRGEIRARV
      781 ETRGRNKPPQ GLVFVPFFDA NKLINKVTLD ATDPISKQTD YKKCAVRIEL LNLA
//