LOCUS AZN91120.1 764 aa PRT BCT 18-DEC-2018 DEFINITION Pseudomonas aeruginosa hypothetical protein protein. ACCESSION CP032541-1122 PROTEIN_ID AZN91120.1 SOURCE Pseudomonas aeruginosa ORGANISM Pseudomonas aeruginosa Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas. REFERENCE 1 (bases 1 to 6264451) AUTHORS Valentine,M., Withers,R.W., Johnson,S.L., Niles,R. and Yu,H. TITLE Attenuated P. aeruginosa strain PAO1 with in-frame deletion of the following genes: toxA, plcH, phzM, wapR, and aroA JOURNAL Unpublished REFERENCE 2 (bases 1 to 6264451) AUTHORS Valentine,M., Withers,R.W., Johnson,S.L., Niles,R. and Yu,H. TITLE Direct Submission JOURNAL Submitted (25-SEP-2018) BioScience, Los Alamos National Laboratory, PO Box 1663 M888, Los Alamos, NM 87545, USA COMMENT Bacteria and source DNA available from Dr. Hongwei Yu. Annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (released 2013). Information about the Pipeline can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 20-SEP-2018 Assembly Method :: Bowtie2 v. 2018-09-20 Assembly Name :: PGN5 Genome Representation :: Full Expected Final Version :: Yes Reference-guided Assembly :: NC_002516.2 Genome Coverage :: 217.64x Sequencing Technology :: Illumina NextSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Date :: 09/26/2018 16:28:44 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline Annotation Method :: Best-placed reference protein set; GeneMarkS+ Annotation Software revision :: 4.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA; repeat_region Genes (total) :: 5,903 CDS (total) :: 5,840 Genes (coding) :: 5,779 CDS (coding) :: 5,779 Genes (RNA) :: 63 rRNAs :: 4 (5S) complete rRNAs :: 4 (5S) tRNAs :: 55 ncRNAs :: 4 Pseudo Genes (total) :: 61 Pseudo Genes (ambiguous residues) :: 12 of 61 Pseudo Genes (frameshifted) :: 22 of 61 Pseudo Genes (incomplete) :: 18 of 61 Pseudo Genes (internal stop) :: 13 of 61 Pseudo Genes (multiple problems) :: 4 of 61 ##Genome-Annotation-Data-END## FEATURES Qualifiers source /organism="Pseudomonas aeruginosa" /mol_type="genomic DNA" /strain="PGN5" /db_xref="taxon:287" /country="USA: WV, Huntington" /collection_date="21-Nov-2017" /collected_by="Progenesis Technologies, LLC" /identified_by="Progenesis Technologies, LLC" /note="genotype: PAO1 toxA-, plcH-, phzM-, wapR-, aroA-" protein /locus_tag="PGN5_05665" /inference="COORDINATES: similar to AA sequence:RefSeq:NP_249760.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /transl_table=11 BEGIN 1 MDIWNWVEKL RADLREAGQE QSARLIDELT AYVCDLEVER AEALLPEVKA LSRTLNNPWL 61 EIFVRHWEMR NRVGNQLEGE TALADAVSLF ELANRDDTQA CPQSVCVTQD LASCYANVDG 121 PGWVEERIEV CDETLARIDP TWACFHCLSN EKAEALLDDG RGEDALAFLA EQEKKILAAG 181 EEVFDSLLEM RVAILLNLGR AEQALALIGE MEEKVEGAEW NNISQPRRLY KAHGLALLGR 241 DEEALEALLP FSEIAPRYRT IWLRAVYLLL QRTPERNTWD FGGRLQQMLE HYSQKGAHRV 301 VIDVASQAIR LALQRGSVWS ARRHLALAEQ HAQQLQRDRG ASQLLAGLRE EIDAAPQQQE 361 LPVPAAELLD WLAAQGSEDA PRNPEKEVQW LLQALAERPD DTALREVAAS ALQACSADDE 421 AIDLLWEYVE RHTDEEQQLA YYLLNALLAR GEYDQVKRLG RLYADSVPLI ALWSEVKLAE 481 KLNDWPELER ACQSVLEISP GSLGAHSLLG KALMEQDRFA EAALAYQRLA GKLEEPQSVQ 541 WDQMTAASAA RDWTMLREVA AGMGMEFAAG DGPIEEDWGW VIVRYIEDGE ALDYYARRTG 601 PVTARVLENA PGNRSQRVGD WVVFDAGLIY PAPEDEEERK RFVPTYAMVH VLESGGYSPS 661 WLVDGVYPGD EAFDAFRETL DARGWKVWVH SNRDYQVTDA SSGEELRAIY FTVATPAQQA 721 PRDLHQALQE ATGQWPHRMC WLRLAEAAEV DTQPHLDAIE RYGL //