LOCUS AZN90520.1 802 aa PRT BCT 18-DEC-2018 DEFINITION Pseudomonas aeruginosa TonB-dependent siderophore receptor protein. ACCESSION CP032541-499 PROTEIN_ID AZN90520.1 SOURCE Pseudomonas aeruginosa ORGANISM Pseudomonas aeruginosa Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas. REFERENCE 1 (bases 1 to 6264451) AUTHORS Valentine,M., Withers,R.W., Johnson,S.L., Niles,R. and Yu,H. TITLE Attenuated P. aeruginosa strain PAO1 with in-frame deletion of the following genes: toxA, plcH, phzM, wapR, and aroA JOURNAL Unpublished REFERENCE 2 (bases 1 to 6264451) AUTHORS Valentine,M., Withers,R.W., Johnson,S.L., Niles,R. and Yu,H. TITLE Direct Submission JOURNAL Submitted (25-SEP-2018) BioScience, Los Alamos National Laboratory, PO Box 1663 M888, Los Alamos, NM 87545, USA COMMENT Bacteria and source DNA available from Dr. Hongwei Yu. Annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (released 2013). Information about the Pipeline can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 20-SEP-2018 Assembly Method :: Bowtie2 v. 2018-09-20 Assembly Name :: PGN5 Genome Representation :: Full Expected Final Version :: Yes Reference-guided Assembly :: NC_002516.2 Genome Coverage :: 217.64x Sequencing Technology :: Illumina NextSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Date :: 09/26/2018 16:28:44 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline Annotation Method :: Best-placed reference protein set; GeneMarkS+ Annotation Software revision :: 4.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA; repeat_region Genes (total) :: 5,903 CDS (total) :: 5,840 Genes (coding) :: 5,779 CDS (coding) :: 5,779 Genes (RNA) :: 63 rRNAs :: 4 (5S) complete rRNAs :: 4 (5S) tRNAs :: 55 ncRNAs :: 4 Pseudo Genes (total) :: 61 Pseudo Genes (ambiguous residues) :: 12 of 61 Pseudo Genes (frameshifted) :: 22 of 61 Pseudo Genes (incomplete) :: 18 of 61 Pseudo Genes (internal stop) :: 13 of 61 Pseudo Genes (multiple problems) :: 4 of 61 ##Genome-Annotation-Data-END## FEATURES Qualifiers source /organism="Pseudomonas aeruginosa" /mol_type="genomic DNA" /strain="PGN5" /db_xref="taxon:287" /country="USA: WV, Huntington" /collection_date="21-Nov-2017" /collected_by="Progenesis Technologies, LLC" /identified_by="Progenesis Technologies, LLC" /note="genotype: PAO1 toxA-, plcH-, phzM-, wapR-, aroA-" protein /locus_tag="PGN5_02500" /inference="COORDINATES: similar to AA sequence:RefSeq:NP_249161.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /transl_table=11 BEGIN 1 MPRPTFRPGL LALAIALAVP APFLHAAPAE QASVRDYRIA AGPLAGTLNR IAAQAGLVLT 61 LDPALAEGRS AHAVQGRFDA PGALREALKG SGLELVENAG GTYSLRKVPE DTLSLQAMTV 121 SGAEEDPLGP TSGYVAKRSM TGTKTDTPIL ETPRSISVAT RQQMTDRAVH NLDDAVRYMP 181 GVVASSFGSD SRSDWLKVRG FKPTQFLDGL PMAVGVYNNP KLETWNLERV ALLRGPASSV 241 YGQTPPGGML DMVSLRPQNV ASHEVKAEVG NYNHKQVSFD STGPLDDEGR FLYRVSGVVR 301 DSNTQVDHID DKRYNIAPSL TWNIDDDTRL TFLGQFNRDD TGITSQFLPL RGTKYDAPFG 361 KVSHHKNLGD PDWEYYDRTY YWLGYAFERR INDVWQFRQN LRYLRNDLSF QALTPASYYA 421 AASDDGTLQR TSTSVDEDVS QFVVDNNFQA DFDTGALRHT LLLGLDHNRT TNEYTSIFGF 481 NVPPTNINNP IYGQPIPKPP RSDAYYDYKQ KTYQTGLYVQ DQIALDNWRL TLGGREDWVH 541 TGATFYNKGD ATNTSRDKKF SGNAALSYIF DNGVAPYISY AESFQPTTGA DMNSTSSLKP 601 TEGKQWEIGV KYQPVGSDSL FTAAVYDLRQ ENVSVSQNIG GTPVTSQTGE VKVSGIELEA 661 TSNVTDNLKM IGAYSYADTE VKKGQYAGNR LQQAPRNQAS LWADYTWHEG TLNGFSVGAG 721 ARYVGSTYGD QANTYDGYAG SYTLYDAAVR YDLGQLNGSL KGVSVAVNAN NLFNKDYLAS 781 CDGYYCYYGD QRSVVGSVSY KW //