LOCUS AZN90302.1 716 aa PRT BCT 18-DEC-2018 DEFINITION Pseudomonas aeruginosa DUF3274 domain-containing protein protein. ACCESSION CP032541-275 PROTEIN_ID AZN90302.1 SOURCE Pseudomonas aeruginosa ORGANISM Pseudomonas aeruginosa Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas. REFERENCE 1 (bases 1 to 6264451) AUTHORS Valentine,M., Withers,R.W., Johnson,S.L., Niles,R. and Yu,H. TITLE Attenuated P. aeruginosa strain PAO1 with in-frame deletion of the following genes: toxA, plcH, phzM, wapR, and aroA JOURNAL Unpublished REFERENCE 2 (bases 1 to 6264451) AUTHORS Valentine,M., Withers,R.W., Johnson,S.L., Niles,R. and Yu,H. TITLE Direct Submission JOURNAL Submitted (25-SEP-2018) BioScience, Los Alamos National Laboratory, PO Box 1663 M888, Los Alamos, NM 87545, USA COMMENT Bacteria and source DNA available from Dr. Hongwei Yu. Annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (released 2013). Information about the Pipeline can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 20-SEP-2018 Assembly Method :: Bowtie2 v. 2018-09-20 Assembly Name :: PGN5 Genome Representation :: Full Expected Final Version :: Yes Reference-guided Assembly :: NC_002516.2 Genome Coverage :: 217.64x Sequencing Technology :: Illumina NextSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Date :: 09/26/2018 16:28:44 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline Annotation Method :: Best-placed reference protein set; GeneMarkS+ Annotation Software revision :: 4.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA; repeat_region Genes (total) :: 5,903 CDS (total) :: 5,840 Genes (coding) :: 5,779 CDS (coding) :: 5,779 Genes (RNA) :: 63 rRNAs :: 4 (5S) complete rRNAs :: 4 (5S) tRNAs :: 55 ncRNAs :: 4 Pseudo Genes (total) :: 61 Pseudo Genes (ambiguous residues) :: 12 of 61 Pseudo Genes (frameshifted) :: 22 of 61 Pseudo Genes (incomplete) :: 18 of 61 Pseudo Genes (internal stop) :: 13 of 61 Pseudo Genes (multiple problems) :: 4 of 61 ##Genome-Annotation-Data-END## FEATURES Qualifiers source /organism="Pseudomonas aeruginosa" /mol_type="genomic DNA" /strain="PGN5" /db_xref="taxon:287" /country="USA: WV, Huntington" /collection_date="21-Nov-2017" /collected_by="Progenesis Technologies, LLC" /identified_by="Progenesis Technologies, LLC" /note="genotype: PAO1 toxA-, plcH-, phzM-, wapR-, aroA-" protein /locus_tag="PGN5_01375" /inference="COORDINATES: similar to AA sequence:RefSeq:NP_248951.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /transl_table=11 BEGIN 1 MNDRVRSRTI VSAQSITLPK GGDVHLVPPP PKPCVTIVVH GVNDLAGCYE RIERGLCQGL 61 NERLDMPPTL PGGQANPGYL TPAGYSLPAD DEGKAENPDV VYYRRKFASG AGGAAVRSVV 121 VPFYWGFREE EQYINKTAAH GEWLDRNGNR LDKSGTKEGG QFVNATTNLP DMWGQGFNGK 181 LFGFISLDWF GGTMTHPLFS AAGRKYMVLA AMRLAMLIKI IRKRYPDDTI NVVGHSQGTL 241 LTLLAHAFLK DDGVAPADGV IMLNSPYGLF EPLNEKLQGW SSQQTREARL ATLKGILEFI 301 CGRRHPVPAL SSVALRNCQG YGAIGGPGWV GGQGCQTTID GERLSFDERD NRGSVYLYFT 361 PQDQTVGLAN VQGIGWRGIA EQVKGLPGRT GLPQGFHQRI FTVRKRNGEK EKIGGHAPPH 421 VYPLLLAGEK TWEDTGLGGK DRFGRANFDQ GDSVLLTAPR LPLPTEARFD FDGAVTAPGE 481 NSASGVYQVR DTLDPIDAAI GVSNGGWKEK DSGHAVAQQV DAALAYRYGR DARSVERALN 541 EGKELAQQTH VFSARELGTG MVLVTRAETP YEARLRLQTA EGHLEPLSFH SAIPNNPEHN 601 RRVLAYDLAI GAGDSVDDVV FYQYLCRVAD WRLDWKASDK GIFSQGDASV DLPDEEVRAL 661 YRAEESKNSQ LIDATVAYRK SGEFPVVVGN RLPSLVGTQT ILDRYHEQAV RFGGTI //