LOCUS AZN90223.1 639 aa PRT BCT 18-DEC-2018 DEFINITION Pseudomonas aeruginosa chemotaxis protein CheA protein. ACCESSION CP032541-191 PROTEIN_ID AZN90223.1 SOURCE Pseudomonas aeruginosa ORGANISM Pseudomonas aeruginosa Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas. REFERENCE 1 (bases 1 to 6264451) AUTHORS Valentine,M., Withers,R.W., Johnson,S.L., Niles,R. and Yu,H. TITLE Attenuated P. aeruginosa strain PAO1 with in-frame deletion of the following genes: toxA, plcH, phzM, wapR, and aroA JOURNAL Unpublished REFERENCE 2 (bases 1 to 6264451) AUTHORS Valentine,M., Withers,R.W., Johnson,S.L., Niles,R. and Yu,H. TITLE Direct Submission JOURNAL Submitted (25-SEP-2018) BioScience, Los Alamos National Laboratory, PO Box 1663 M888, Los Alamos, NM 87545, USA COMMENT Bacteria and source DNA available from Dr. Hongwei Yu. Annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (released 2013). Information about the Pipeline can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 20-SEP-2018 Assembly Method :: Bowtie2 v. 2018-09-20 Assembly Name :: PGN5 Genome Representation :: Full Expected Final Version :: Yes Reference-guided Assembly :: NC_002516.2 Genome Coverage :: 217.64x Sequencing Technology :: Illumina NextSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Date :: 09/26/2018 16:28:44 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline Annotation Method :: Best-placed reference protein set; GeneMarkS+ Annotation Software revision :: 4.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA; repeat_region Genes (total) :: 5,903 CDS (total) :: 5,840 Genes (coding) :: 5,779 CDS (coding) :: 5,779 Genes (RNA) :: 63 rRNAs :: 4 (5S) complete rRNAs :: 4 (5S) tRNAs :: 55 ncRNAs :: 4 Pseudo Genes (total) :: 61 Pseudo Genes (ambiguous residues) :: 12 of 61 Pseudo Genes (frameshifted) :: 22 of 61 Pseudo Genes (incomplete) :: 18 of 61 Pseudo Genes (internal stop) :: 13 of 61 Pseudo Genes (multiple problems) :: 4 of 61 ##Genome-Annotation-Data-END## FEATURES Qualifiers source /organism="Pseudomonas aeruginosa" /mol_type="genomic DNA" /strain="PGN5" /db_xref="taxon:287" /country="USA: WV, Huntington" /collection_date="21-Nov-2017" /collected_by="Progenesis Technologies, LLC" /identified_by="Progenesis Technologies, LLC" /note="genotype: PAO1 toxA-, plcH-, phzM-, wapR-, aroA-" protein /locus_tag="PGN5_00955" /inference="COORDINATES: similar to AA sequence:RefSeq:NP_248868.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /transl_table=11 BEGIN 1 MPQDMSQFLQ VFFEETEEHL ATLELLLIGL DLDRPDSETL HGIFRAAHSI KGSSGMFGFD 61 DITAVTHELE TLLDRIRCGQ MHLRPDMISS FLEARDVLQR LLDAHRSGRP DPGVPLLETV 121 ERLRGWLRVP EQEAAEEGFG LFDDAPARET ADDDAFGFFD EGPGAPERAA APEAFGLFDE 181 APGAPAASEA FGLFDEAPGS PPAEERAFGL FDGAPGSPAA PSAPAQAVAA PARGAVAPVR 241 GDGESGSIRV SVEKIDSLIN LVGELVITQA MLGQLGEQLD PSRHERLQHA LAQLEHNTRD 301 LQESVMSIRM LPINFIFSRF PRLVRDTATR LGKQVELHLH GEHTELDKSV IEKLSDPLTH 361 IVRNSIDHGI ETPAERLAAG KPASGTVKLA ASHQGGSVVV EVSDDGRGLS RPRILAKARE 421 RNLPVHDGMS DAEVWQLVFM PGFSTAETVT ELSGRGVGMD VVKRNIGAMG GRIDIDSAPG 481 MGTRIGIRLP LTLAILDGLI VAVEAVNYVI PLTYIVESLQ ARSDDVRGLG GEDNAMIRVR 541 GEYLPLFSLH ELLRIGGEAP APEQGIVVIL ESEGRSFALQ VDELVGQQQV VIKSLEQNFR 601 RVEGIAGATI MGDGSVALIL DVDALPRLAA REDTADERH //