LOCUS AZN84542.1 568 aa PRT BCT 18-DEC-2018 DEFINITION Pseudomonas aeruginosa hypothetical protein protein. ACCESSION CP032540-7 PROTEIN_ID AZN84542.1 SOURCE Pseudomonas aeruginosa ORGANISM Pseudomonas aeruginosa Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas. REFERENCE 1 (bases 1 to 6264422) AUTHORS Valentine,M., Withers,R.W., Johnson,S.L., Niles,R. and Yu,H. TITLE Attenuated P. aeruginosa strain PAO1 with in-frame deletion of the following genes: toxA, plcH, phzM, and wapR JOURNAL Unpublished REFERENCE 2 (bases 1 to 6264422) AUTHORS Valentine,M., Withers,R.W., Johnson,S.L., Niles,R. and Yu,H. TITLE Direct Submission JOURNAL Submitted (25-SEP-2018) BioScience, Los Alamos National Laboratory, PO Box 1663 M888, Los Alamos, NM 87545, USA COMMENT Bacteria and source DNA available from Dr. Hongwei Yu (yuh@marshall.edu). Annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (released 2013). Information about the Pipeline can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 20-SEP-2018 Assembly Method :: Bowtie2 v. 2018-09-20 Genome Representation :: Full Expected Final Version :: Yes Reference-guided Assembly :: NC_002516.2 Genome Coverage :: 368.17x Sequencing Technology :: Illumina NextSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Date :: 09/26/2018 12:47:58 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline Annotation Method :: Best-placed reference protein set; GeneMarkS+ Annotation Software revision :: 4.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA; repeat_region Genes (total) :: 5,631 CDS (total) :: 5,568 Genes (coding) :: 5,507 CDS (coding) :: 5,507 Genes (RNA) :: 63 rRNAs :: 4 (5S) complete rRNAs :: 4 (5S) tRNAs :: 55 ncRNAs :: 4 Pseudo Genes (total) :: 61 Pseudo Genes (ambiguous residues) :: 13 of 61 Pseudo Genes (frameshifted) :: 21 of 61 Pseudo Genes (incomplete) :: 18 of 61 Pseudo Genes (internal stop) :: 13 of 61 Pseudo Genes (multiple problems) :: 4 of 61 ##Genome-Annotation-Data-END## FEATURES Qualifiers source /organism="Pseudomonas aeruginosa" /mol_type="genomic DNA" /strain="PGN4" /isolation_source="derived from laboratory strain" /db_xref="taxon:287" /country="USA: WV, Huntington" /collection_date="13-Sep-2014" /collected_by="Progenesis Technologies, LLC" /identified_by="Progenesis Technologies, LLC" /note="genotype: PAO1 toxA-, plcH-, phzM-, wapR-" protein /locus_tag="PGN4_00035" /inference="COORDINATES: similar to AA sequence:RefSeq:NP_064727.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /transl_table=11 BEGIN 1 MKRLKKTLHL SSLSLASLAL SSAALAAAPV MLDQGKEWTE SHRQDFYSRD QGSQVMPLPW 61 LKALRQPDGT PFLADSLARY GYLPNPKAPA EGLPVGFTVA GTGARQMVGM TCSACHTRQI 121 EVKGTAYRID GGPAIVDFQA FLADLDRAVG PLTSDDAAFD AFAKPILGAN PPPGARDALL 181 AAVKEWYEPY HTLIERALPK DTWGPARLDA VSMIFNRLTG LDIGTAPPYL IPDNIKAADA 241 PVRYPFLWNA ARQNKTQWPG FAANGNDLLG LARNVGEVYG VFATFHPQKS KFHLLGMDYL 301 KINSANFHGL GKLEDLIKKI GPPKWPWAVD KHLARKGALI FARKTDEGGC VECHGIRIKD 361 LVLWDTPLRD VGSDSRQHAI LDGQVQTGVM EGARMPFGQP LKATDGAFDV LAVAVAGSIL 421 QHFVPILGEK HDAKAAAVKP ESVMTDETRQ LLTAFQKPVR TQADPYPYES RVLQGIWAAA 481 PYLHNGSVPT LEELLKPAAE RVESFPVGSA YDVDKVGLAA QQTQFGSYVL KTTGCEQRDS 541 GNSRCGHEYG TSLSAEEKRA LLEYLKVL //