LOCUS AWM35024.1 778 aa PRT BCT 23-MAY-2018 DEFINITION Hymenobacter nivis xanthine dehydrogenase family protein molybdopterin-binding subunit protein. ACCESSION CP029145-4147 PROTEIN_ID AWM35024.1 SOURCE Hymenobacter nivis ORGANISM Hymenobacter nivis Bacteria; Bacteroidota; Cytophagia; Cytophagales; Hymenobacteraceae; Hymenobacter. REFERENCE 1 (bases 1 to 5027597) AUTHORS Terashima,M. TITLE Complete genome of Antarctic heterotrophic bacterium Hymenobacter nivis JOURNAL Unpublished REFERENCE 2 (bases 1 to 5027597) AUTHORS Terashima,M. TITLE Direct Submission JOURNAL Submitted (25-APR-2018) Institute of Low Temperature Science, Hokkaido University, Kita-19, Nishi-8, Kita-ku, Sapporo, Hokkaido 060-0819, Japan COMMENT Bacteria and source DNA available from DSM 101755. Annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (released 2013). Information about the Pipeline can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: HGAP v. SMRT Analysis v2.3.0 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 1.0x Sequencing Technology :: PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Date :: 04/26/2018 12:58:26 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline Annotation Method :: Best-placed reference protein set; GeneMarkS+ Annotation Software revision :: 4.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA; repeat_region Genes (total) :: 4,451 CDS (total) :: 4,396 Genes (coding) :: 4,252 CDS (coding) :: 4,252 Genes (RNA) :: 55 rRNAs :: 3, 3, 3 (5S, 16S, 23S) complete rRNAs :: 3, 3, 3 (5S, 16S, 23S) tRNAs :: 43 ncRNAs :: 3 Pseudo Genes (total) :: 144 Pseudo Genes (ambiguous residues) :: 0 of 144 Pseudo Genes (frameshifted) :: 51 of 144 Pseudo Genes (incomplete) :: 71 of 144 Pseudo Genes (internal stop) :: 48 of 144 Pseudo Genes (multiple problems) :: 24 of 144 CRISPR Arrays :: 1 ##Genome-Annotation-Data-END## FEATURES Qualifiers source /organism="Hymenobacter nivis" /mol_type="genomic DNA" /strain="NBRC 111535" /isolation_source="Red snow" /culture_collection="DSM:101755" /culture_collection="NBRC:111535" /type_material="type strain of Hymenobacter nivis" /db_xref="taxon:1850093" /country="Antarctica: Yatude Valley" /collection_date="2006" protein /locus_tag="DDQ68_21000" /inference="COORDINATES: similar to AA sequence:RefSeq:WP_017721221.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /transl_table=11 BEGIN 1 MDTEPKFFET NPAGGVVGQP LSRIDGYAKV TGQARYSAEY NNLPGIVHAV LKTSDVAKGR 61 ITGFDTSAAQ KQPGVLAILT HQNIPKLAKT PNDAEGKKAI GAPMGFLPLT GDQIYYAGQP 121 VAVVVADTLE HAQYAATLLK VQIAAEKPLA SYEDPKAQLY DPEKVQDGKT DGHTKRGDAR 181 AAFAAAPVQL THRYIHAINH HNPMEPGATT AHWEAPDRLT VYDSTQGVTR TQKSLSAMLG 241 LSAEQVRVVT KYLGGGFGCK GSCWPHTILT VQAAKAVGRP VKLSLTRPQM FTSMGHREDQ 301 EQTLKIGATK DGKLTALIHE KTSTTSPWDN YAEPNSKIIN MLYECPTFES TYQLARANVM 361 TSTFMRAPGE GPGSFAIECS MDDLAEKLGI DPLEIRLRNY AEKDPSTGQQ WSSKSLKQCY 421 ARGAELFGWS KRNPKAGATR DGKLLVGWGM ATASYPVHNS QGTARARLYA DGHAVVQSGA 481 TDLGTGTYTV ITQVAADGLG LPMEKIRFEL GDTKLPTAPN SGGSVAAGTV SSSVYLAVQD 541 VWQKLIKVAV LDKKSPLFKA KITDVEAKMG RLQLKANPSK GEGFADVMKR ADLSDIEGNG 601 QGRYGSGYED AQAAANADPT KKDEVGHHSM HSFGAHFCEV KVDPELGTVR VTRWVSVHAA 661 GRILNAKTAR SQIIGGSIFG IGCALMENTV RDQNLARYTN ASLADYHIPT NADIPEMTVE 721 FVDEHDPYIN AMGVKGIGEI SMVGVSAAVA NAVAHATGRR VRSLPITPDK VLGAKAVS //