LOCUS       AWM33206.1              1018 aa    PRT              BCT 23-MAY-2018
DEFINITION  Hymenobacter nivis molybdopterin oxidoreductase protein.
ACCESSION   CP029145-2119
PROTEIN_ID  AWM33206.1
SOURCE      Hymenobacter nivis
  ORGANISM  Hymenobacter nivis
            Bacteria; Bacteroidota; Cytophagia; Cytophagales;
            Hymenobacteraceae; Hymenobacter.
REFERENCE   1  (bases 1 to 5027597)
  AUTHORS   Terashima,M.
  TITLE     Complete genome of Antarctic heterotrophic bacterium Hymenobacter
            nivis
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5027597)
  AUTHORS   Terashima,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-APR-2018) Institute of Low Temperature Science,
            Hokkaido University, Kita-19, Nishi-8, Kita-ku, Sapporo, Hokkaido
            060-0819, Japan
COMMENT     Bacteria and source DNA available from DSM 101755.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: HGAP v. SMRT Analysis v2.3.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1.0x
            Sequencing Technology  :: PacBio
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 04/26/2018 12:58:26
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.5
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 4,451
            CDS (total)                       :: 4,396
            Genes (coding)                    :: 4,252
            CDS (coding)                      :: 4,252
            Genes (RNA)                       :: 55
            rRNAs                             :: 3, 3, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 3, 3 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 144
            Pseudo Genes (ambiguous residues) :: 0 of 144
            Pseudo Genes (frameshifted)       :: 51 of 144
            Pseudo Genes (incomplete)         :: 71 of 144
            Pseudo Genes (internal stop)      :: 48 of 144
            Pseudo Genes (multiple problems)  :: 24 of 144
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Qualifiers
     source          /organism="Hymenobacter nivis"
                     /mol_type="genomic DNA"
                     /strain="NBRC 111535"
                     /isolation_source="Red snow"
                     /culture_collection="DSM:101755"
                     /culture_collection="NBRC:111535"
                     /type_material="type strain of Hymenobacter nivis"
                     /db_xref="taxon:1850093"
                     /country="Antarctica: Yatude Valley"
                     /collection_date="2006"
     protein         /locus_tag="DDQ68_10710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018477328.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /transl_table=11
BEGIN
        1 MKYWKGIEEL ESTPEFMSTA FAEFLPVKES HESKDATSAP RRDFLKLMGF GIGAVALAAC
       61 ETPVHKAIPY LNKPEEVDPT ISNFYASTYF TGSDYNAVLV KNRDGRPIKL EGNPESPISR
      121 GGLSARAQAA VLDLYDGGRL QHFAVKGQRT ETAEVDRQIQ SKLAATTGKI VIVSPTIISP
      181 STKKAIAAFA ARYRTTEHVM YDAQSASGLL QANNGVLPGY DFSRANVIVS IGADFLGTWI
      241 SPVEFAKQYV KNRKVSNDKR FMSRHFQFET AMSLTGSNAD VRESVKPSEW GLVAVALYNA
      301 VVGGGSAPAF SNPRVAPQIA KAAAELKANR GASLVVSGSN DPAVQALVTA LNQSLGNVGT
      361 TVDLAAPSNV RQGDDVRMAA LVKEMNAGTV GAVIFYNANP VYNHPLAAQV KSGIAKVPLS
      421 ISFNDRLDET GSICDYATPD HHWLESWNDF EPKRGFLSLS QPAITPIFAT RQAQESLLRW
      481 AGNNETYYSF LRNNWRGVLG NTNFTAAWDK AVHDGVATGT GLPAAPAMAT AALSASEAVA
      541 RITGAPKPAA NLVEVALYEK VGLPTSGSGA NNPFLQELPD PVSKATWGNY LAVPRAMAVA
      601 NKWEQGDVIK ITAPNVASIE LPVLVQPGQA VDTVSIALGY GRVLSGKAGD GVGANAAPFL
      661 VATPNGILYA TAVTLEKTAA KSPIAQTQTH HTIMDRRSVV QENTLAKYKE NPKEVTEYEK
      721 VVTPDGLEKP NKVSLWQDYQ YNNHHWGMAI DLNSCIGCGS CVLGCQTENN IAVVGKQQVI
      781 NRREMHWMRI DRYYSSDHHE SEFDTKGKLS TYSAMEDPSD NPQVIFQPMM CQQCNHAPCE
      841 TVCPVLATTH SSEGLNQMTY NRCIGTRYCG NNCPYKVRRF NWFSYYSNEK FETVNGHMFT
      901 DLGRMVLNPD VTVRARGVME KCSFCIQRIQ LGKLEAKKQK RRPQDGEIVS ACAQSCPTDA
      961 IVFGDMRDTT SRISQLLRRE DGERAFHSLD SINVQPNVTY LTKIRNSPSE MFGPEEEA
//