LOCUS       AWM32710.1               872 aa    PRT              BCT 23-MAY-2018
DEFINITION  Hymenobacter nivis glucosidase protein.
ACCESSION   CP029145-1564
PROTEIN_ID  AWM32710.1
SOURCE      Hymenobacter nivis
  ORGANISM  Hymenobacter nivis
            Bacteria; Bacteroidota; Cytophagia; Cytophagales;
            Hymenobacteraceae; Hymenobacter.
REFERENCE   1  (bases 1 to 5027597)
  AUTHORS   Terashima,M.
  TITLE     Complete genome of Antarctic heterotrophic bacterium Hymenobacter
            nivis
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5027597)
  AUTHORS   Terashima,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-APR-2018) Institute of Low Temperature Science,
            Hokkaido University, Kita-19, Nishi-8, Kita-ku, Sapporo, Hokkaido
            060-0819, Japan
COMMENT     Bacteria and source DNA available from DSM 101755.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: HGAP v. SMRT Analysis v2.3.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1.0x
            Sequencing Technology  :: PacBio
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 04/26/2018 12:58:26
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.5
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 4,451
            CDS (total)                       :: 4,396
            Genes (coding)                    :: 4,252
            CDS (coding)                      :: 4,252
            Genes (RNA)                       :: 55
            rRNAs                             :: 3, 3, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 3, 3 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 144
            Pseudo Genes (ambiguous residues) :: 0 of 144
            Pseudo Genes (frameshifted)       :: 51 of 144
            Pseudo Genes (incomplete)         :: 71 of 144
            Pseudo Genes (internal stop)      :: 48 of 144
            Pseudo Genes (multiple problems)  :: 24 of 144
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Qualifiers
     source          /organism="Hymenobacter nivis"
                     /mol_type="genomic DNA"
                     /strain="NBRC 111535"
                     /isolation_source="Red snow"
                     /culture_collection="DSM:101755"
                     /culture_collection="NBRC:111535"
                     /type_material="type strain of Hymenobacter nivis"
                     /db_xref="taxon:1850093"
                     /country="Antarctica: Yatude Valley"
                     /collection_date="2006"
     protein         /locus_tag="DDQ68_07895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020605680.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /transl_table=11
BEGIN
        1 MTAEHERLRD VGPWRTFGPY LAERQWGTVR EDYSAAGEPW NFTTHDMARS YTYRWGEDGL
       61 GGISDDQQLL CFAPAFWNGQ DPILKERLFG LSGPEGNHGE DVKELYYYLD NTPTHSYMRM
      121 LYKYPQHAFP YDWLVQQNAK RTRDDPEFEL ADTAVFREDK YFDIFIEYAK AGPQDVLITI
      181 TAHNRGPQAA PLHVLPTLWF RNTWAWGDDD YYPDLRATDD GCIAVEHRDL PGLALHADGA
      241 PALLFCDNET NAPRLYRAAP RPGAKFFKDG LNECVVGGHA AAVNADRGGT KAAAHYVLTI
      301 EAGESQTLRL RLGPNDLATP FADFDALVAQ RRQEADAFYG ALQCDLAGAD ARAVQRQALA
      361 GMLWNKQFYD YDVRRWLAGD PTLPAPPASR LEGRNADWLH VRNHDIISMP DNWEYPWYAA
      421 WDLAFHAVPL ALVDPEFAKS QLRLLCHDRY MHANGQLPAY EWQFGDVNPP VHAWATFRVF
      481 KMDQKQCGGP GDVAFLETVF HRLLLNFTWW VNRKDTAGRN IFEGGFLGLD NIGVFDRSAP
      541 MPPGVYIEQA DGTAWMALYA LNLMRMALEL AQTNPVYEDL AGKYFEHFLA IAQAMTGFGP
      601 HDIDMWDEED EFYYDVLKSP QGRTPLKVRS MVGLVPLFAV EVLDDELLCN APQFLARMNW
      661 ILANRPDLAG LVSRWQEPGK GDRHLLSLLR GHRLKALLRR MLDEAEFLSA HGVRALSKYH
      721 LDHPYVFRTD GKSFTVDYEP SESTTSLYGG NSNWRGPVWF PVNYMLIEGL QRFHHYYGDD
      781 FKVEFPTGSG QYSTLLAIAE QLTARLTGLF LRGENGQRPC FGADAQQQTD PHFKDYLLFH
      841 EYFHGDTGQG LGASHQTGWT GLVAKLLQPR GK
//