LOCUS AWM32509.1 1089 aa PRT BCT 23-MAY-2018 DEFINITION Hymenobacter nivis acriflavin resistance protein protein. ACCESSION CP029145-1333 PROTEIN_ID AWM32509.1 SOURCE Hymenobacter nivis ORGANISM Hymenobacter nivis Bacteria; Bacteroidota; Cytophagia; Cytophagales; Hymenobacteraceae; Hymenobacter. REFERENCE 1 (bases 1 to 5027597) AUTHORS Terashima,M. TITLE Complete genome of Antarctic heterotrophic bacterium Hymenobacter nivis JOURNAL Unpublished REFERENCE 2 (bases 1 to 5027597) AUTHORS Terashima,M. TITLE Direct Submission JOURNAL Submitted (25-APR-2018) Institute of Low Temperature Science, Hokkaido University, Kita-19, Nishi-8, Kita-ku, Sapporo, Hokkaido 060-0819, Japan COMMENT Bacteria and source DNA available from DSM 101755. Annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (released 2013). Information about the Pipeline can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: HGAP v. SMRT Analysis v2.3.0 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 1.0x Sequencing Technology :: PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Date :: 04/26/2018 12:58:26 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline Annotation Method :: Best-placed reference protein set; GeneMarkS+ Annotation Software revision :: 4.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA; repeat_region Genes (total) :: 4,451 CDS (total) :: 4,396 Genes (coding) :: 4,252 CDS (coding) :: 4,252 Genes (RNA) :: 55 rRNAs :: 3, 3, 3 (5S, 16S, 23S) complete rRNAs :: 3, 3, 3 (5S, 16S, 23S) tRNAs :: 43 ncRNAs :: 3 Pseudo Genes (total) :: 144 Pseudo Genes (ambiguous residues) :: 0 of 144 Pseudo Genes (frameshifted) :: 51 of 144 Pseudo Genes (incomplete) :: 71 of 144 Pseudo Genes (internal stop) :: 48 of 144 Pseudo Genes (multiple problems) :: 24 of 144 CRISPR Arrays :: 1 ##Genome-Annotation-Data-END## FEATURES Qualifiers source /organism="Hymenobacter nivis" /mol_type="genomic DNA" /strain="NBRC 111535" /isolation_source="Red snow" /culture_collection="DSM:101755" /culture_collection="NBRC:111535" /type_material="type strain of Hymenobacter nivis" /db_xref="taxon:1850093" /country="Antarctica: Yatude Valley" /collection_date="2006" protein /locus_tag="DDQ68_06735" /inference="COORDINATES: similar to AA sequence:RefSeq:WP_020597230.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /transl_table=11 BEGIN 1 MIKTALARPI AVIVALLGVL VFAALALGRI PIDIFPRLNL PTIYIAQPYG GMTAAQMEGF 61 IATRYQNQML YVSGIKDVEV KNIQGLCLVK CTFYEDVNMA QAAGEVASQV SRVLSYMPPG 121 TVPPTVVRFD ASSLPVGELV FSSTSASLGQ MQDLASTRIR PLFSQIPGAS APPPFGGNER 181 TVVVRVDPEK MKSYRLTPDE IVSAIVKNNQ VSPAGSVGMG NYMVMTPSNT VLDKIPEFLN 241 IPLRQGVGPM VFIHDVATVE DATDVPVGYA LINGKRSVYI PVTKSADAST MSVVNALKAK 301 LPEMRALLPD NVQLSYEFDQ SVYVSQAVHS LAFEGGLGAL LTGLVVFLFL GDWRSSAIVI 361 LTIPISILTA ILLLQLTGQT INIMTLSGLS LAIGILVDQA TVVIENIHQH QEMGKTKARA 421 ILDASQEVSF PLLLITLSIL AVFAPAFLMS GVPRGMFIPL SLSVGFAIIA SYTLSQTFVP 481 VVANWWLKGH QHTSEHELSL LPDLKQPREV SQEGYEVHHQ DKVKGFERVK LAYLGILDKL 541 LRHRALVGTV YGVVCATVIG VCFYFIGQDM MPKITHSKQF QVRIVAPEGL RIERTEERTK 601 EVISLIQQIV GPKNVAITSA FVGMTPSSYG TSALYVFNAG PNEADLQVNL AEDYQVKNLD 661 ALKDQIRQAV HQHLPDVQLS YEPIELTDKI MSQGAQTPIE ILVGGKSLAD GKAYADKLVA 721 RLKGIAYLRD VRINQPLSYP TVQIDVDRER AAQFGLTPDQ IAKSLVAATS SSRFTAKNLW 781 LDQSKGFAYQ VQVQLQSQDM KSEADMQNLP LVPGQLRPTL GDVATLHTAN VPGEYDRIGP 841 RRIITVSANI DHQDLGTATR DVQRAIKAVG APPKGSVVEL RGLAKLLTET LSSLQTGLGL 901 AVVVIFLLLA ANYQSLKVAA VVLVTVPAVL AGALALLLLT GQTLNLQSYM GVIMSVGVSV 961 ANAVLIVTNA ESLRLRYRDA VAAARLAGAA RLRPILMTSL AMVAGMLPMA SGLGEAGEQS 1021 APLGRAVIGG LLASTVAALF VLPVVFAALQ RKTTFASVSL DPDDPASATY DGYEAPATEH 1081 SLSEQPVLV //