LOCUS       AWM32509.1              1089 aa    PRT              BCT 23-MAY-2018
DEFINITION  Hymenobacter nivis acriflavin resistance protein protein.
ACCESSION   CP029145-1333
PROTEIN_ID  AWM32509.1
SOURCE      Hymenobacter nivis
  ORGANISM  Hymenobacter nivis
            Bacteria; Bacteroidota; Cytophagia; Cytophagales;
            Hymenobacteraceae; Hymenobacter.
REFERENCE   1  (bases 1 to 5027597)
  AUTHORS   Terashima,M.
  TITLE     Complete genome of Antarctic heterotrophic bacterium Hymenobacter
            nivis
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5027597)
  AUTHORS   Terashima,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-APR-2018) Institute of Low Temperature Science,
            Hokkaido University, Kita-19, Nishi-8, Kita-ku, Sapporo, Hokkaido
            060-0819, Japan
COMMENT     Bacteria and source DNA available from DSM 101755.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: HGAP v. SMRT Analysis v2.3.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1.0x
            Sequencing Technology  :: PacBio
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 04/26/2018 12:58:26
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.5
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 4,451
            CDS (total)                       :: 4,396
            Genes (coding)                    :: 4,252
            CDS (coding)                      :: 4,252
            Genes (RNA)                       :: 55
            rRNAs                             :: 3, 3, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 3, 3 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 144
            Pseudo Genes (ambiguous residues) :: 0 of 144
            Pseudo Genes (frameshifted)       :: 51 of 144
            Pseudo Genes (incomplete)         :: 71 of 144
            Pseudo Genes (internal stop)      :: 48 of 144
            Pseudo Genes (multiple problems)  :: 24 of 144
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Qualifiers
     source          /organism="Hymenobacter nivis"
                     /mol_type="genomic DNA"
                     /strain="NBRC 111535"
                     /isolation_source="Red snow"
                     /culture_collection="DSM:101755"
                     /culture_collection="NBRC:111535"
                     /type_material="type strain of Hymenobacter nivis"
                     /db_xref="taxon:1850093"
                     /country="Antarctica: Yatude Valley"
                     /collection_date="2006"
     protein         /locus_tag="DDQ68_06735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020597230.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /transl_table=11
BEGIN
        1 MIKTALARPI AVIVALLGVL VFAALALGRI PIDIFPRLNL PTIYIAQPYG GMTAAQMEGF
       61 IATRYQNQML YVSGIKDVEV KNIQGLCLVK CTFYEDVNMA QAAGEVASQV SRVLSYMPPG
      121 TVPPTVVRFD ASSLPVGELV FSSTSASLGQ MQDLASTRIR PLFSQIPGAS APPPFGGNER
      181 TVVVRVDPEK MKSYRLTPDE IVSAIVKNNQ VSPAGSVGMG NYMVMTPSNT VLDKIPEFLN
      241 IPLRQGVGPM VFIHDVATVE DATDVPVGYA LINGKRSVYI PVTKSADAST MSVVNALKAK
      301 LPEMRALLPD NVQLSYEFDQ SVYVSQAVHS LAFEGGLGAL LTGLVVFLFL GDWRSSAIVI
      361 LTIPISILTA ILLLQLTGQT INIMTLSGLS LAIGILVDQA TVVIENIHQH QEMGKTKARA
      421 ILDASQEVSF PLLLITLSIL AVFAPAFLMS GVPRGMFIPL SLSVGFAIIA SYTLSQTFVP
      481 VVANWWLKGH QHTSEHELSL LPDLKQPREV SQEGYEVHHQ DKVKGFERVK LAYLGILDKL
      541 LRHRALVGTV YGVVCATVIG VCFYFIGQDM MPKITHSKQF QVRIVAPEGL RIERTEERTK
      601 EVISLIQQIV GPKNVAITSA FVGMTPSSYG TSALYVFNAG PNEADLQVNL AEDYQVKNLD
      661 ALKDQIRQAV HQHLPDVQLS YEPIELTDKI MSQGAQTPIE ILVGGKSLAD GKAYADKLVA
      721 RLKGIAYLRD VRINQPLSYP TVQIDVDRER AAQFGLTPDQ IAKSLVAATS SSRFTAKNLW
      781 LDQSKGFAYQ VQVQLQSQDM KSEADMQNLP LVPGQLRPTL GDVATLHTAN VPGEYDRIGP
      841 RRIITVSANI DHQDLGTATR DVQRAIKAVG APPKGSVVEL RGLAKLLTET LSSLQTGLGL
      901 AVVVIFLLLA ANYQSLKVAA VVLVTVPAVL AGALALLLLT GQTLNLQSYM GVIMSVGVSV
      961 ANAVLIVTNA ESLRLRYRDA VAAARLAGAA RLRPILMTSL AMVAGMLPMA SGLGEAGEQS
     1021 APLGRAVIGG LLASTVAALF VLPVVFAALQ RKTTFASVSL DPDDPASATY DGYEAPATEH
     1081 SLSEQPVLV
//