LOCUS       AUI88707.1               534 aa    PRT              BCT 03-JAN-2018
DEFINITION  Vibrio azureus transcriptional regulator protein.
ACCESSION   CP018617-117
PROTEIN_ID  AUI88707.1
SOURCE      Vibrio azureus
  ORGANISM  Vibrio azureus
            Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales;
            Vibrionaceae; Vibrio.
REFERENCE   1  (bases 1 to 1573591)
  AUTHORS   Yoshizawa,S. and Kogure,K.
  TITLE     Diversity of luminous bacteria
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 1573591)
  AUTHORS   Yoshizawa,S. and Kogure,K.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-DEC-2016) Marine Microbiology, Atmosphere and Ocean
            Research Institute, The University of Tokyo, 5-1-5, Kashiwanoha,
            Kashiwa-shi, Chiba 277-8564, Japan
COMMENT     Molecules not circularized.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Newbler v. 2.7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 55.6x
            Sequencing Technology  :: 454
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2016 14:07:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.0
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 4,358
            CDS (total)                       :: 4,209
            Genes (coding)                    :: 4,110
            CDS (coding)                      :: 4,110
            Genes (RNA)                       :: 149
            rRNAs                             :: 11, 10, 10 (5S, 16S, 23S)
            complete rRNAs                    :: 11, 10, 10 (5S, 16S, 23S)
            tRNAs                             :: 114
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 99
            Pseudo Genes (ambiguous residues) :: 0 of 99
            Pseudo Genes (frameshifted)       :: 45 of 99
            Pseudo Genes (incomplete)         :: 51 of 99
            Pseudo Genes (internal stop)      :: 30 of 99
            Pseudo Genes (multiple problems)  :: 20 of 99
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Qualifiers
     source          /organism="Vibrio azureus"
                     /mol_type="genomic DNA"
                     /strain="LC2-005"
                     /isolation_source="seawater"
                     /culture_collection="NBRC:104587"
                     /type_material="type strain of Vibrio azureus"
                     /db_xref="taxon:512649"
                     /chromosome="2"
                     /geo_loc_name="Japan: Kuroshio region"
                     /collection_date="01-Jul-2005"
     protein         /locus_tag="BS333_14285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010380475.1"
                     /note="sigma 54-dependent; regulates genes involved in
                     forming a 2',3'-cyclic phosphodiester on RNA; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /transl_table=11
BEGIN
        1 MSKKTIAVSL IGTQLDFSGK REDRWAKWRP NISLCSQEDI VIDELHMLHD NHSERLASHV
       61 ALDIGSVSPE TQVTLYNINF SDPWDFEEVY SKLYDWCQQQ RFDTEQNDYL FHITTGTHVV
      121 QICSFLLTES RHFPGRLIQT SPDKKNSNKS IGRVQIIDLD LSKYDQLATR FDREHLEGKA
      181 FLKGGIQTKN ADFNRLITQV EKVAIRSSDP MLLTGPTGAG KSQLATRIFQ LKKRRSMLKG
      241 DLVAVNCATL KGENAMAALF GHTRGAFTGA QKERSGYLLT AHQGMLFLDE IGELGIEEQA
      301 MLLHAIENKA FHPVGSDKTV TSDFQLIAGT NKDLKAEVAK GHFREDLLAR INLWTYKLPA
      361 LKERREDIPA NIDYEIEAYA QKHSQRVQFN KEAKRAFEKF ATSQEAIWSG NFRDLSSAIT
      421 RLCTLADSSR ISIDDVEDEI IRLRSAWQGP DEYRTGNLLV NYLTEYQISE LDQFDIQQLN
      481 HVLSVCLRHS SMASAGRELF NVSRTKKSQT NDSTRLQKYL SKFGLKWRLI REVG
//