LOCUS       AUI87692.1               592 aa    PRT              BCT 03-JAN-2018
DEFINITION  Vibrio azureus terminase protein.
ACCESSION   CP018617-237
PROTEIN_ID  AUI87692.1
SOURCE      Vibrio azureus
  ORGANISM  Vibrio azureus
            Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales;
            Vibrionaceae; Vibrio.
REFERENCE   1  (bases 1 to 1573591)
  AUTHORS   Yoshizawa,S. and Kogure,K.
  TITLE     Diversity of luminous bacteria
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 1573591)
  AUTHORS   Yoshizawa,S. and Kogure,K.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-DEC-2016) Marine Microbiology, Atmosphere and Ocean
            Research Institute, The University of Tokyo, 5-1-5, Kashiwanoha,
            Kashiwa-shi, Chiba 277-8564, Japan
COMMENT     Molecules not circularized.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Newbler v. 2.7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 55.6x
            Sequencing Technology  :: 454
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2016 14:07:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.0
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 4,358
            CDS (total)                       :: 4,209
            Genes (coding)                    :: 4,110
            CDS (coding)                      :: 4,110
            Genes (RNA)                       :: 149
            rRNAs                             :: 11, 10, 10 (5S, 16S, 23S)
            complete rRNAs                    :: 11, 10, 10 (5S, 16S, 23S)
            tRNAs                             :: 114
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 99
            Pseudo Genes (ambiguous residues) :: 0 of 99
            Pseudo Genes (frameshifted)       :: 45 of 99
            Pseudo Genes (incomplete)         :: 51 of 99
            Pseudo Genes (internal stop)      :: 30 of 99
            Pseudo Genes (multiple problems)  :: 20 of 99
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Qualifiers
     source          /organism="Vibrio azureus"
                     /mol_type="genomic DNA"
                     /strain="LC2-005"
                     /isolation_source="seawater"
                     /culture_collection="NBRC:104587"
                     /type_material="type strain of Vibrio azureus"
                     /db_xref="taxon:512649"
                     /chromosome="2"
                     /geo_loc_name="Japan: Kuroshio region"
                     /collection_date="01-Jul-2005"
     protein         /locus_tag="BS333_14895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016789671.1"
                     /note="gpP; P protein; capsid packaging; P protein is
                     probably the ATPase subunit of the terminase complex,
                     which directs cos cleavage of closed monomeric dsDNA
                     circles into linear genomes with 19 nt cohesive ssDNA
                     ends; Q, P and M proteins are needed to package DNA into
                     capsid proheads and conversion into mature capsids;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /transl_table=11
BEGIN
        1 MAYTPETRHA ARALYLKAWT PKEIASELGL NSTRILYHWA DKYGWRDMLR EQTIDESIAR
       61 RIETLLELEN PTKSQLDMLD RLIKHHVQLK KFNAQSQPVS ENAPSADKET VKPPKSKSAR
      121 SQPPQKSQPK KKSKKNNIAH LSEDHFTNWH SSLFEYQHTM RKNLHQRIRN ILKSRQIGAT
      181 YYFSGEALEN AILTGDNQIF LSASRAQAEV FRSYIIAIAE EFLGVELTGN PIILSNGAEL
      241 RFLSTNSKTA QSYHGHVYVD EYFWIPKFDE LNKLASAMAT HKNWRKTYFS TPSAKTHQAY
      301 PFWTGEQWRR GRETRANIEF PTFDDYRDGG RLCPDKQWRY VVTIEDAAAG GCELFDIDEL
      361 RDEYSKDDFD NLFMCIFVDG ASSVFKFSAL EKAMVDISRW QDFKPNDESP FGRREVWLGY
      421 DPSRTRDNAC LVVIAPPIVA VEKFRVLEKH YWKGLNFQYQ AQQVSKVFER YNVSYLGIDT
      481 TGIGAGVYDL ISKKHPRETV AIQYSNESKN RLVMKMIDVV EANRIQFDAE HKDIAMAFMA
      541 IKRAPTNSGN NMTFKAERSE LTGHADAFWA ISHACINEPL DHTEKRKSTW QM
//