LOCUS       AUI87320.1               646 aa    PRT              BCT 03-JAN-2018
DEFINITION  Vibrio azureus phosphomethylpyrimidine synthase ThiC protein.
ACCESSION   CP018616-2606
PROTEIN_ID  AUI87320.1
SOURCE      Vibrio azureus
  ORGANISM  Vibrio azureus
            Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales;
            Vibrionaceae; Vibrio.
REFERENCE   1  (bases 1 to 3027809)
  AUTHORS   Yoshizawa,S. and Kogure,K.
  TITLE     Diversity of luminous bacteria
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 3027809)
  AUTHORS   Yoshizawa,S. and Kogure,K.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-DEC-2016) Marine Microbiology, Atmosphere and Ocean
            Research Institute, The University of Tokyo, 5-1-5, Kashiwanoha,
            Kashiwa-shi, Chiba 277-8564, Japan
COMMENT     Molecules not circularized.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Newbler v. 2.7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 55.6x
            Sequencing Technology  :: 454
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2016 14:07:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.0
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 4,358
            CDS (total)                       :: 4,209
            Genes (coding)                    :: 4,110
            CDS (coding)                      :: 4,110
            Genes (RNA)                       :: 149
            rRNAs                             :: 11, 10, 10 (5S, 16S, 23S)
            complete rRNAs                    :: 11, 10, 10 (5S, 16S, 23S)
            tRNAs                             :: 114
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 99
            Pseudo Genes (ambiguous residues) :: 0 of 99
            Pseudo Genes (frameshifted)       :: 45 of 99
            Pseudo Genes (incomplete)         :: 51 of 99
            Pseudo Genes (internal stop)      :: 30 of 99
            Pseudo Genes (multiple problems)  :: 20 of 99
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Qualifiers
     source          /organism="Vibrio azureus"
                     /mol_type="genomic DNA"
                     /strain="LC2-005"
                     /isolation_source="seawater"
                     /culture_collection="NBRC:104587"
                     /type_material="type strain of Vibrio azureus"
                     /db_xref="taxon:512649"
                     /chromosome="1"
                     /country="Japan: Kuroshio region"
                     /collection_date="01-Jul-2005"
     protein         /locus_tag="BS333_13690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020196949.1"
                     /note="catalyzes the formation of
                     4-amino-2-methyl-5-phosphomethylpyrimidine from
                     5-amino-1-(5-phospho-D-ribosyl)imidazole and
                     S-adenosyl-L-methionine in thiamine biosynthesis; Derived
                     by automated computational analysis using gene prediction
                     method: Protein Homology."
                     /transl_table=11
BEGIN
        1 MSNRKQARLE AKQFIDTLSV QPYPNSSKVY IEGSRPDIRV PMREISLVDS LIGGTKEAPI
       61 FAPNEPVRVY DTSGLYTDPN HTINLYNGLP KLREGWIAER ADTELLDEVS SVYTKERLED
      121 ETLDDLRYGN LPRIRRAKSG QCVTQLHYAR KGIVTPEMEY IALRENMGRA QYRDEVLNQQ
      181 HPGQSFGANL PKDITAEFVR KEVAEGRAII PSNINHPESE PMIIGRNFLV KVNANIGNSS
      241 VTSSIEEEVE KLVWATRWGG DTVMDLSTGR NIHETREWIL RNSPVPIGTV PMYQALEKVN
      301 GVAENLNWEV MRDTLIEQAE QGVDYFTIHA GLLLRYVPMT AKRVTGIVSR GGSIIAKWCL
      361 AHHQESFLYT HFREICEICA KYDVALSLGD GLRPGSVADA NDEAQFAELR TLGELTKIAW
      421 EYDVQVIIEG PGHVPMHMIK ENMQEQLEHC HEAPFYTLGP LTTDVAPGYD HITSGIGAAM
      481 IGWYGCAMLC YVTPKEHLGL PNKEDVKVGM ITYKLAAHAA DLAKGHPGAQ VRDNALSKAR
      541 FEFRWEDQFN LSLDPDTARA FHDETLPQES GKVAHFCSMC GPKFCSMKIS QEVREYAKDT
      601 EQVAADQAIS VKMLDDPLEG MRQKSQEFRE TGSELYHPAA HAEVSD
//