LOCUS AUI85885.1 2576 aa PRT BCT 03-JAN-2018
DEFINITION Vibrio azureus hypothetical protein protein.
ACCESSION CP018616-1052
PROTEIN_ID AUI85885.1
SOURCE Vibrio azureus
ORGANISM Vibrio azureus
Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales;
Vibrionaceae; Vibrio.
REFERENCE 1 (bases 1 to 3027809)
AUTHORS Yoshizawa,S. and Kogure,K.
TITLE Diversity of luminous bacteria
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 3027809)
AUTHORS Yoshizawa,S. and Kogure,K.
TITLE Direct Submission
JOURNAL Submitted (05-DEC-2016) Marine Microbiology, Atmosphere and Ocean
Research Institute, The University of Tokyo, 5-1-5, Kashiwanoha,
Kashiwa-shi, Chiba 277-8564, Japan
COMMENT Molecules not circularized.
Annotation was added by the NCBI Prokaryotic Genome Annotation
Pipeline (released 2013). Information about the Pipeline can be
found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
##Genome-Assembly-Data-START##
Assembly Method :: Newbler v. 2.7
Genome Representation :: Full
Expected Final Version :: Yes
Genome Coverage :: 55.6x
Sequencing Technology :: 454
##Genome-Assembly-Data-END##
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Date :: 12/09/2016 14:07:14
Annotation Pipeline :: NCBI Prokaryotic Genome
Annotation Pipeline
Annotation Method :: Best-placed reference protein
set; GeneMarkS+
Annotation Software revision :: 4.0
Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA;
repeat_region
Genes (total) :: 4,358
CDS (total) :: 4,209
Genes (coding) :: 4,110
CDS (coding) :: 4,110
Genes (RNA) :: 149
rRNAs :: 11, 10, 10 (5S, 16S, 23S)
complete rRNAs :: 11, 10, 10 (5S, 16S, 23S)
tRNAs :: 114
ncRNAs :: 4
Pseudo Genes (total) :: 99
Pseudo Genes (ambiguous residues) :: 0 of 99
Pseudo Genes (frameshifted) :: 45 of 99
Pseudo Genes (incomplete) :: 51 of 99
Pseudo Genes (internal stop) :: 30 of 99
Pseudo Genes (multiple problems) :: 20 of 99
CRISPR Arrays :: 2
##Genome-Annotation-Data-END##
FEATURES Qualifiers
source /organism="Vibrio azureus"
/mol_type="genomic DNA"
/strain="LC2-005"
/isolation_source="seawater"
/culture_collection="NBRC:104587"
/type_material="type strain of Vibrio azureus"
/db_xref="taxon:512649"
/chromosome="1"
/country="Japan: Kuroshio region"
/collection_date="01-Jul-2005"
protein /locus_tag="BS333_05545"
/inference="COORDINATES: protein
motif:HMM:PF03534.11,HMM:PF05593.12,HMM:PF07591.9,
HMM:TIGR01643,HMM:TIGR03696"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/transl_table=11
BEGIN
1 MVSNNHLINK TTIWALLVAS FLPGQAISAS STPTLELSGE YKTSGGNATY SVPISIAPGR
61 AGHQPVLNLR YQSNLPNGLM GIGWQLGGQS TIYRCGKNLN IDGLKGGVGF NQEDRYCLDG
121 ERLIAVNGAD GKDLTEYRVK KNGYDKIVSF GDSGGSGPAY FKIWRTDGSV LEYGVSADSR
181 VELPNQSHVY KWAINKKTDA SKHNHIQYQY REDNAAGIHQ LRNISYVGGK VEFRYEDRKD
241 KSSQYLFGSV LNRTERLKQV VTFDADAKQI GTYGINYRYS NETERSLVNK VQYCSVQGAC
301 STPIDFEWVD ELAQNSMRKK SSLDFARANY FDVDRDGNKE LYGVEILESH FETCSSRRPK
361 FNPNIWAQRG RYRKTPGKIR RLDGTYTGPG DLGSFALIGS IDSPALYSLS VLSPNGVCGP
421 HETYDYWRFA DVKDVSNYTP ELDGSMKQYG SNLKFAADLN GDGKQTLQNK PTYKKKPRSV
481 KVIDIDNDGR DDWVYVDTDH KRLIFRLSQR NHAVYSLPVQ TRSYGGQGRT KEYFSLSHVN
541 FRDINNDGYL DFSVIDLERR GVSVYLFDGK NYIKSASSQS KIFNLSSPHP INIIDFNANG
601 YPELCLINTC WANEAGKINF QKPRTVADIK DVYLVDDLNG DGVDDFVGSV GESSSKYQAY
661 KQTSYKYQSE GKASNRIKAI KEALKSFEIN YSSATNKTVH TQKRYFDYPF LNTTPVRYLV
721 REVIKIPLGA GYPMGQYYSL SVLPTRYSYN YEGAKYHALG GGFLGFETIT EVESIAFNLT
781 SIWLNSYEMT TTVSHYNQLD LKKAGELKKV EVYKHVGKRR FIYQASDKIT STSYEYQTVD
841 KGNGAYQVYP SKVIKQQFES GALQKTTQVS SSINAFGAIT REETTVSNAL NRKDRFTTRV
901 DNQYLSQGYS TTSYTYNTIT SNTVSYMAAK FARYQDGLTA YCSTTSKDIY FKPEDRFVLI
961 HGDVDTPILV TQHQERFRYH VTGTSRDPYN GITQQTGALS QISQAEFDRQ TLTPCGQYQL
1021 GNVIGDSQLE LSTTTNSVAQ SVTQTGQEYW KVGARSRSVK TITDHQSGLS KTTQNDYSYN
1081 SQGLLSQAIT SGSEYETGMG GGGRLAFAYQ YDTWGNVVSE SQSGSDLPTR TTRYGFEANG
1141 LKLKTTTNAK GHTIRTVYDG QGRLVSETSA LKGRTTRYEY DAFGREVRRT LPGKNNRIEQ
1201 TYQLGAQCEH RLSTTASCVT TTQSNGVTQV MQYDYADREV RRLHRAFDGR WVVVDTGWDR
1261 QGHKTFVTTA QFLDQKGKAP RVTFEYDKFD REIRRIEPAN RGTLAIFTTQ YKGFRIEGTD
1321 ARGFKRSTTH NVMGHVIRKD EPLGAYQTYQ YYPDGKLKRT QDSAGNITQI QYDNLGYRTQ
1381 LDDPDIGHWY YRYNALGELV YKRDANGVVT QVEYDTLGRK VSQKEGNETS QWRYDERGAL
1441 GTLSWMSGKG QRSDYFYDQA GLLQEKAVTV GKEIFSTQYT YDAFERIARE VRPDGKTKTS
1501 ELGKPDNQRL AVEYVYNQYG YVSAVRSPKT FADDIFASAK FREDIRQLLQ QSINQANLYL
1561 QRASRYAKQE GFFREKYHEY RNKQVDVFNL DEAAANQLKD HHRYKQWCDQ QGTCYLRPAT
1621 WVILHDDVTI PLDVTLEGDI FRIDTERTSS GSKDGLATHE MTANPVPDNA LDGLTLTQMQ
1681 DMLMSGDYDG NGTLDMMRQG DIYAAKADDS LRGELLFAAE DLEQAANIAH RQYKEYRTLA
1741 SDLLGLVDKV AKLSGVYCDF ANTLGGDRVN ASLRGRCQSS GGVSQADMLD TILTNAELAA
1801 ANNSDAYVYY WQRQSTDAFD HTLSEMLGNG LMNTYEHDVN TGRVNVIATY EANKVFSSDG
1861 VSKPSRAPHI RQLRYKYDNH DNVTERYDEQ LGITDRWTYD ALDRVDSNTI ALADKTQHGL
1921 NNPDLTGKRS YRYDKLGNIV YKSDIGDYQY SGIGAGPHAV TQANGLSYQY DAAGNMLSAK
1981 AKGSKTDERI LRWSPYNKPT KIIRKGKTVE FSYDANHERY LKRSSDGTVT FYFGKTYERV
2041 KNLKTGEIQH QHFVFADGKL IALNTQTTDS NNKLKNKQIR YLHYDALESV DMVTDGYGLV
2101 VEKRSYDTWG KQRHVLWQDS SAASVIQAAI TNRGYTGHEE ITEVGLIHMN GRVYDQELGR
2161 FVSADPLVQA PYVVNSFNRY SYVMNNPLKY TDPKGYFCSD ADGSNASSSC DVGSDTSSND
2221 STGDSNGRSS DGKGSGDSTK NNESEQTSNL SSEGEQKSQA EEEVESGGWI SAIAGLAYDL
2281 SPISTVVDIA NGVVETGEAL AAGEFKQAGM AVGGALFGVV AKKFKAPVNF YKKVSKKFGK
2341 QCFIRGTMIH VQGGLKPIED IQVGDLVASK DELTGDTDWK PVVTLFRNEN KRIFNLTLLN
2401 GDGEKEQLGV TAEHPFWVEG QGWVEAGVLE VGQRISTVDG AELAVHSIAY DEELHTTYNF
2461 EVGDYHSYFV GENGAWVHND CSSPEFESIP KHGKIKKGKA NPEPTNPQQA LDNSIELPGK
2521 TTRRVSVDKQ TGEFSVFDEH TPGKFHGHSR TWKELDQTMQ ATLRKAGLVN KKGKIK
//