LOCUS ASS93197.1 1440 aa PRT BCT 08-AUG-2017 DEFINITION Peribacillus simplex NBRC 15720 = DSM 1321 PolC-type DNA polymerase III protein. ACCESSION CP017704-799 PROTEIN_ID ASS93197.1 SOURCE Peribacillus simplex NBRC 15720 = DSM 1321 ORGANISM Peribacillus simplex NBRC 15720 = DSM 1321 Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Peribacillus. REFERENCE 1 (bases 1 to 5645783) AUTHORS Park,M.-K., Lee,Y.-J., Yi,H., Bahn,Y.-S., Kim,J.F. and Lee,D.-W. TITLE The whole genome sequencing and assembly of Bacillus simplex DSM 1321 strain JOURNAL Unpublished REFERENCE 2 (bases 1 to 5645783) AUTHORS Park,M.-K., Lee,Y.-J., Yi,H., Bahn,Y.-S., Kim,J.F. and Lee,D.-W. TITLE Direct Submission JOURNAL Submitted (17-OCT-2016) Kyungpook National University, School of Applied Biosciences, 80 Daehak-Ro, Bukgu, Daegu 41566, South Korea COMMENT Annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (released 2013). Information about the Pipeline can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ This genome has a base modification file available. ##Genome-Assembly-Data-START## Assembly Method :: SMRT analysis 2.3 v. HGAP protocol 2 Genome Coverage :: missing Sequencing Technology :: PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Date :: 10/17/2016 13:55:10 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline Annotation Method :: Best-placed reference protein set; GeneMarkS+ Annotation Software revision :: 3.3 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA; repeat_region Genes (total) :: 5,348 CDS (total) :: 5,228 Genes (coding) :: 5,118 CDS (coding) :: 5,118 Genes (RNA) :: 120 rRNAs :: 13, 12, 12 (5S, 16S, 23S) complete rRNAs :: 13, 12, 12 (5S, 16S, 23S) tRNAs :: 77 ncRNAs :: 6 Pseudo Genes (total) :: 110 Pseudo Genes (ambiguous residues) :: 0 of 110 Pseudo Genes (frameshifted) :: 73 of 110 Pseudo Genes (incomplete) :: 32 of 110 Pseudo Genes (internal stop) :: 34 of 110 Pseudo Genes (multiple problems) :: 28 of 110 ##Genome-Annotation-Data-END## FEATURES Qualifiers source /organism="Peribacillus simplex NBRC 15720 = DSM 1321" /mol_type="genomic DNA" /strain="DSM 1321" /isolation_source="soil" /type_material="type strain of Bacillus simplex" /db_xref="taxon:1349754" /collection_date="1989" protein /gene="polC" /locus_tag="BS1321_04010" /inference="EXISTENCE: similar to AA sequence:RefSeq:WP_013084765.1" /note="catalyzes DNA-template-directed extension of the 3'- end of a DNA strand by one nucleotide at a time; required for leading strand synthesis; PolC exhibits 3' to 5' exonuclease activity; Derived by automated computational analysis using gene prediction method: Protein Homology." /transl_table=11 BEGIN 1 MDQNPNSGRE RFQLLLQQMD LTEDAFVNYF IGAEIDKLSI ERESKTWHFA FNIPALIPCS 61 VHTRLATHLA STFSHIAKVT FNLNVANPQV TEQLVKEYWK NCIGELEGMS PALLSLLNEQ 121 VPTVNGYKLI VSARNDTEAG QLKRKYSGII SNIYQTFGFP PLTLEAEVKE TVSNPDYQKF 181 LEEKQKEDAE KGLAALVEMQ KKESEKGGDD GVYEGPVKIG YTIKEDADFR RIEQIIDEER 241 RIAIEGFVFD AEVRELRSGR SLLTFKVTDY TSSILVKMFS RDKEDAAILA RVKKGMWVRA 301 QGSIQNDTFV RDLVMIANDI NEISKQGRQD KAPEGEKRVE LHMHTPMSQM DAVTPTSALV 361 AQAAKWGHKA VAITDHAGAQ SFPEAYSAGK KNGIKILYGV EVNLVNDGVP IVYNEAHIAL 421 ADATYVVFDV ETTGLSAVYD TIIEFAAVKI RGGDIIDRFE SFANPHHPLS NTTIELTGIT 481 DDLVENAPEV SEVLEKFKDW AGDAILVAHN AAFDMGFLNI GYKNMGYPKA SNPVLDTLEL 541 ARFLYPEFKN HRLNTLCKKF DIDLTQHHRA IYDAEATGYL MLKMLKDAME KEITHHDQLN 601 DNMGKGNAYQ RSRPSHCTLI AQTQAGLKNL FKLISITHID YFYRVPRLPR SQLKKYREGI 661 LVGSGCDKGE VFEGMMQKGF EEVVDIAEFY DYLEIHPKEV YQHLIELEYV RDDKSLETII 721 SNIVKLGEKL DKPVVATGNV HYLDPNDKIY RKILVNSQGG ANPLNRHKLP DVHFRTTDEM 781 LREFSFLGSE KAKEVVVTNT NKIADMIEEI KPIKDELYTP KIEGAEEEMR EMSYGMARKI 841 YGENLPEIVE ARLEKELKSI IGHGFAVIYL ISHKLVKKSL NDGYLVGSRG SVGSSFVATM 901 TEITEVNPLP PHYVCPECKK SEFFNDGSVG SGFDLPDKDC PDCGIAYTKD GHDIPFETFL 961 GFKGDKVPDI DLNFSGEYQP KAHNYTKVLF GEEYVYRAGT IGTVAEKTAY GYVKGYSSDN 1021 NIHMRGAETD RLVAGCTGVK RTTGQHPGGI IVVPDYMDIY DFTPIQFPAD DRNSEWKTTH 1081 FDFHSIHDNI LKLDILGHDD PTVIRMLQDL SGIDPKTVPT DDPEVMKIFS STESLGVTEE 1141 QIMCKTGTLG IPEFGTRFVR QMLEDTKPTT FSELVQISGL SHGTDVWLSN AQELIHNRIC 1201 TLSEVIGCRD DIMVYLIYQG LDPSLAFKIM ESVRKGKGLS EEFEEEMRKN EVPEWYIDSC 1261 KKIKYMFPKA HAAAYVLMAV RIAYFKVHLP LLYYAAYFTV RADDFEIDAM TRGSQAIKSK 1321 MEEIMVKGLD ASTKEKNTLT VLELALEMCE RGFSFAKVDL YKSSADQFLI EGNTLIPPFN 1381 SIPGLGTNAA INIVNARKNG EFLSKEDLQQ RGKVSKTILE YLDKQGCLES LPEQNQLSLF //