LOCUS       ASS93197.1              1440 aa    PRT              BCT 08-AUG-2017
DEFINITION  Peribacillus simplex NBRC 15720 = DSM 1321 PolC-type DNA
            polymerase III protein.
ACCESSION   CP017704-799
PROTEIN_ID  ASS93197.1
SOURCE      Peribacillus simplex NBRC 15720 = DSM 1321
  ORGANISM  Peribacillus simplex NBRC 15720 = DSM 1321
            Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae;
            Peribacillus.
REFERENCE   1  (bases 1 to 5645783)
  AUTHORS   Park,M.-K., Lee,Y.-J., Yi,H., Bahn,Y.-S., Kim,J.F. and Lee,D.-W.
  TITLE     The whole genome sequencing and assembly of Bacillus simplex DSM
            1321 strain
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5645783)
  AUTHORS   Park,M.-K., Lee,Y.-J., Yi,H., Bahn,Y.-S., Kim,J.F. and Lee,D.-W.
  TITLE     Direct Submission
  JOURNAL   Submitted (17-OCT-2016) Kyungpook National University, School of
            Applied Biosciences, 80 Daehak-Ro, Bukgu, Daegu 41566, South Korea
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            This genome has a base modification file available.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: SMRT analysis 2.3 v. HGAP protocol 2
            Genome Coverage       :: missing
            Sequencing Technology :: PacBio
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 10/17/2016 13:55:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 3.3
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 5,348
            CDS (total)                       :: 5,228
            Genes (coding)                    :: 5,118
            CDS (coding)                      :: 5,118
            Genes (RNA)                       :: 120
            rRNAs                             :: 13, 12, 12 (5S, 16S, 23S)
            complete rRNAs                    :: 13, 12, 12 (5S, 16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 110
            Pseudo Genes (ambiguous residues) :: 0 of 110
            Pseudo Genes (frameshifted)       :: 73 of 110
            Pseudo Genes (incomplete)         :: 32 of 110
            Pseudo Genes (internal stop)      :: 34 of 110
            Pseudo Genes (multiple problems)  :: 28 of 110
            ##Genome-Annotation-Data-END##
FEATURES             Qualifiers
     source          /organism="Peribacillus simplex NBRC 15720 = DSM 1321"
                     /mol_type="genomic DNA"
                     /strain="DSM 1321"
                     /isolation_source="soil"
                     /type_material="type strain of Bacillus simplex"
                     /db_xref="taxon:1349754"
                     /collection_date="1989"
     protein         /gene="polC"
                     /locus_tag="BS1321_04010"
                     /inference="EXISTENCE: similar to AA
                     sequence:RefSeq:WP_013084765.1"
                     /note="catalyzes DNA-template-directed extension of the
                     3'- end of a DNA strand by one nucleotide at a time;
                     required for leading strand synthesis; PolC exhibits 3' to
                     5' exonuclease activity; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /transl_table=11
BEGIN
        1 MDQNPNSGRE RFQLLLQQMD LTEDAFVNYF IGAEIDKLSI ERESKTWHFA FNIPALIPCS
       61 VHTRLATHLA STFSHIAKVT FNLNVANPQV TEQLVKEYWK NCIGELEGMS PALLSLLNEQ
      121 VPTVNGYKLI VSARNDTEAG QLKRKYSGII SNIYQTFGFP PLTLEAEVKE TVSNPDYQKF
      181 LEEKQKEDAE KGLAALVEMQ KKESEKGGDD GVYEGPVKIG YTIKEDADFR RIEQIIDEER
      241 RIAIEGFVFD AEVRELRSGR SLLTFKVTDY TSSILVKMFS RDKEDAAILA RVKKGMWVRA
      301 QGSIQNDTFV RDLVMIANDI NEISKQGRQD KAPEGEKRVE LHMHTPMSQM DAVTPTSALV
      361 AQAAKWGHKA VAITDHAGAQ SFPEAYSAGK KNGIKILYGV EVNLVNDGVP IVYNEAHIAL
      421 ADATYVVFDV ETTGLSAVYD TIIEFAAVKI RGGDIIDRFE SFANPHHPLS NTTIELTGIT
      481 DDLVENAPEV SEVLEKFKDW AGDAILVAHN AAFDMGFLNI GYKNMGYPKA SNPVLDTLEL
      541 ARFLYPEFKN HRLNTLCKKF DIDLTQHHRA IYDAEATGYL MLKMLKDAME KEITHHDQLN
      601 DNMGKGNAYQ RSRPSHCTLI AQTQAGLKNL FKLISITHID YFYRVPRLPR SQLKKYREGI
      661 LVGSGCDKGE VFEGMMQKGF EEVVDIAEFY DYLEIHPKEV YQHLIELEYV RDDKSLETII
      721 SNIVKLGEKL DKPVVATGNV HYLDPNDKIY RKILVNSQGG ANPLNRHKLP DVHFRTTDEM
      781 LREFSFLGSE KAKEVVVTNT NKIADMIEEI KPIKDELYTP KIEGAEEEMR EMSYGMARKI
      841 YGENLPEIVE ARLEKELKSI IGHGFAVIYL ISHKLVKKSL NDGYLVGSRG SVGSSFVATM
      901 TEITEVNPLP PHYVCPECKK SEFFNDGSVG SGFDLPDKDC PDCGIAYTKD GHDIPFETFL
      961 GFKGDKVPDI DLNFSGEYQP KAHNYTKVLF GEEYVYRAGT IGTVAEKTAY GYVKGYSSDN
     1021 NIHMRGAETD RLVAGCTGVK RTTGQHPGGI IVVPDYMDIY DFTPIQFPAD DRNSEWKTTH
     1081 FDFHSIHDNI LKLDILGHDD PTVIRMLQDL SGIDPKTVPT DDPEVMKIFS STESLGVTEE
     1141 QIMCKTGTLG IPEFGTRFVR QMLEDTKPTT FSELVQISGL SHGTDVWLSN AQELIHNRIC
     1201 TLSEVIGCRD DIMVYLIYQG LDPSLAFKIM ESVRKGKGLS EEFEEEMRKN EVPEWYIDSC
     1261 KKIKYMFPKA HAAAYVLMAV RIAYFKVHLP LLYYAAYFTV RADDFEIDAM TRGSQAIKSK
     1321 MEEIMVKGLD ASTKEKNTLT VLELALEMCE RGFSFAKVDL YKSSADQFLI EGNTLIPPFN
     1381 SIPGLGTNAA INIVNARKNG EFLSKEDLQQ RGKVSKTILE YLDKQGCLES LPEQNQLSLF
//