LOCUS ASD28404.1 816 aa PRT BCT 22-JUN-2017 DEFINITION Brevundimonas diminuta S9 family peptidase protein. ACCESSION CP021995-565 PROTEIN_ID ASD28404.1 SOURCE Brevundimonas diminuta ORGANISM Brevundimonas diminuta Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas. REFERENCE 1 (bases 1 to 3385620) AUTHORS Chang,H., Feng,Y., Li,Z., Xue,J. and Cheng,D. TITLE Biodegradation of gentamicin by bacterial consortia AMQD4 in synthetic medium and raw gentamicin sewage JOURNAL Unpublished REFERENCE 2 (bases 1 to 3385620) AUTHORS Liu,Y. TITLE Direct Submission JOURNAL Submitted (15-JUN-2017) IARRP, CAAS, ZhongGuancun, Beijing 100081, China COMMENT Annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (released 2013). Information about the Pipeline can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: SOAPdenovo v. 2.04 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 296.25x Sequencing Technology :: Illumina HiSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Date :: 06/16/2017 13:13:51 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline Annotation Method :: Best-placed reference protein set; GeneMarkS+ Annotation Software revision :: 4.2 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA; repeat_region Genes (total) :: 3,288 CDS (total) :: 3,227 Genes (coding) :: 3,192 CDS (coding) :: 3,192 Genes (RNA) :: 61 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 51 ncRNAs :: 4 Pseudo Genes (total) :: 35 Pseudo Genes (ambiguous residues) :: 0 of 35 Pseudo Genes (frameshifted) :: 9 of 35 Pseudo Genes (incomplete) :: 21 of 35 Pseudo Genes (internal stop) :: 8 of 35 Pseudo Genes (multiple problems) :: 3 of 35 ##Genome-Annotation-Data-END## FEATURES Qualifiers source /organism="Brevundimonas diminuta" /mol_type="genomic DNA" /strain="BZC3" /isolation_source="gentamicin fermentation residue" /db_xref="taxon:293" /country="China: Shandong" /collection_date="2016" protein /locus_tag="CD943_02890" /inference="COORDINATES: similar to AA sequence:RefSeq:WP_003170123.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /transl_table=11 BEGIN 1 MRAALPALVL AAAVPALALP VAAVAQDAAP TYHQPPSPIA QILDAKPNPG VSVSPDRKTL 61 LLTDRSNLPA IAELAEPMLR LAGYRINPKN NGPANSRVSW LTGLSFQAVD GGPARPVTGL 121 PANARLTNVS WAPNGQAVAF LVNAPNGLEL WTADVAQAKA RKLNGPMVNA AAGSGFSWLS 181 DSSGLLVLAV PAGRGLAPNV DHPPEGPIIT ETGGRAAPVR TYQDLLSNVG DEALFDYYFT 241 SQPTVVSLNG RARSVGQPGV ILGVSTSPDG RYILQTRVKK PYSYVVPASL FPSDVIVTDM 301 NGRQVHRVAD LPLRDNVPTP FDAVAPGPRA VQWRADADAT LVWAEAQDGG DPRNAAEVRD 361 RVFMLRAPFN DRVQTLADLK ERYAGTTWGR NDAAIVNSRW FNTRHETRTL VDPSNPGAGR 421 VLVDRNYQDR YNDPGSVVTE PNARGRSVMR FNADGSKVFV EGDGATREGA YPFLDLMDLN 481 TGETERVWRS AQGEYESVVG VLDEAGRKLV TYRESRTDPA NLRVRDLDGG VTQLTNFPDP 541 APQLAGATRQ LITYTRDDGV ELSGTLYLPA GYDKDRDGPL PLLMWAYPAE FTDAAVAGQV 601 VDTDNRFVRP SGSSHLFLLT QGYAILDNPT MPIIGRDGAE PNDTYIEQLS ASAKAAVDAV 661 VALGVAERER IAVGGHSYGA FMTANLLAHT DLFKTGIARS GAYNRTLTPF GFQAEQRSYW 721 EATETYNAMS PFTYANKVNE PILLIHGEAD ANSGTFPIQT ERFYAALKGN GATARYVVLP 781 KEDHGYRARE SVGHTLYEMS SWLDRWMKPT TAASQE //