LOCUS ASD28127.1 555 aa PRT BCT 22-JUN-2017 DEFINITION Brevundimonas diminuta energy-dependent translational throttle protein EttA protein. ACCESSION CP021995-2988 PROTEIN_ID ASD28127.1 SOURCE Brevundimonas diminuta ORGANISM Brevundimonas diminuta Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas. REFERENCE 1 (bases 1 to 3385620) AUTHORS Chang,H., Feng,Y., Li,Z., Xue,J. and Cheng,D. TITLE Biodegradation of gentamicin by bacterial consortia AMQD4 in synthetic medium and raw gentamicin sewage JOURNAL Unpublished REFERENCE 2 (bases 1 to 3385620) AUTHORS Liu,Y. TITLE Direct Submission JOURNAL Submitted (15-JUN-2017) IARRP, CAAS, ZhongGuancun, Beijing 100081, China COMMENT Annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (released 2013). Information about the Pipeline can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: SOAPdenovo v. 2.04 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 296.25x Sequencing Technology :: Illumina HiSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Date :: 06/16/2017 13:13:51 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline Annotation Method :: Best-placed reference protein set; GeneMarkS+ Annotation Software revision :: 4.2 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA; repeat_region Genes (total) :: 3,288 CDS (total) :: 3,227 Genes (coding) :: 3,192 CDS (coding) :: 3,192 Genes (RNA) :: 61 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 51 ncRNAs :: 4 Pseudo Genes (total) :: 35 Pseudo Genes (ambiguous residues) :: 0 of 35 Pseudo Genes (frameshifted) :: 9 of 35 Pseudo Genes (incomplete) :: 21 of 35 Pseudo Genes (internal stop) :: 8 of 35 Pseudo Genes (multiple problems) :: 3 of 35 ##Genome-Annotation-Data-END## FEATURES Qualifiers source /organism="Brevundimonas diminuta" /mol_type="genomic DNA" /strain="BZC3" /isolation_source="gentamicin fermentation residue" /db_xref="taxon:293" /country="China: Shandong" /collection_date="2016" protein /locus_tag="CD943_15220" /inference="COORDINATES: similar to AA sequence:RefSeq:NP_420951.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /transl_table=11 BEGIN 1 MAQQYIFQMQ GLTKTFPGGK KIFENIWLSF YNDAKIGVVG VNGSGKSTLL KIMAGLDSEF 61 QGEARAADGV KRGYLEQEPH LDPALNVRQN VEAWCEEKQW VNRFNEVAAE LGENYTDELM 121 EEMTALQEKI DAGDVWDIDS RIDQAMGALR CPPDDWEVTN LSGGEKRRVA LARLLLSKPD 181 MLLMDEPTNH LDAESVAWLQ HHLENFPGCV ILVTHDRYFL DQVTKWTLEL DRGKGHPHEG 241 NYSSWLEAKQ KRVVQEQSES EARQRALTRE LEWVRSGAKA RQAKSKARLA AYEKMVAEQE 301 NSRQAQSFAV IQIPPGPRLG NVVLEVDGLK KSYGDKVLFD NLTFKLPPNG IVGVIGPNGA 361 GKSTMFKLIT GQETPDGGTI KVGETVKLAY VDQSRDDLKP DDTIWQAISG GTDIMMVGKR 421 EINTRAYVGS FNFKGGDQQK KVGQLSGGER NRVHLAKTLA TGGNLILLDE PTNDLDIETL 481 QNLEEALEEF AGCAVVISHD RWFLDRLATH ILAFEGDGHV EWFEGNFEAY EQDKMRRLGA 541 DSIIPKRIQH QKFGR //