LOCUS ASD28065.1 438 aa PRT BCT 22-JUN-2017 DEFINITION Brevundimonas diminuta proline--tRNA ligase protein. ACCESSION CP021995-2923 PROTEIN_ID ASD28065.1 SOURCE Brevundimonas diminuta ORGANISM Brevundimonas diminuta Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas. REFERENCE 1 (bases 1 to 3385620) AUTHORS Chang,H., Feng,Y., Li,Z., Xue,J. and Cheng,D. TITLE Biodegradation of gentamicin by bacterial consortia AMQD4 in synthetic medium and raw gentamicin sewage JOURNAL Unpublished REFERENCE 2 (bases 1 to 3385620) AUTHORS Liu,Y. TITLE Direct Submission JOURNAL Submitted (15-JUN-2017) IARRP, CAAS, ZhongGuancun, Beijing 100081, China COMMENT Annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (released 2013). Information about the Pipeline can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: SOAPdenovo v. 2.04 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 296.25x Sequencing Technology :: Illumina HiSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Date :: 06/16/2017 13:13:51 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline Annotation Method :: Best-placed reference protein set; GeneMarkS+ Annotation Software revision :: 4.2 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA; repeat_region Genes (total) :: 3,288 CDS (total) :: 3,227 Genes (coding) :: 3,192 CDS (coding) :: 3,192 Genes (RNA) :: 61 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 51 ncRNAs :: 4 Pseudo Genes (total) :: 35 Pseudo Genes (ambiguous residues) :: 0 of 35 Pseudo Genes (frameshifted) :: 9 of 35 Pseudo Genes (incomplete) :: 21 of 35 Pseudo Genes (internal stop) :: 8 of 35 Pseudo Genes (multiple problems) :: 3 of 35 ##Genome-Annotation-Data-END## FEATURES Qualifiers source /organism="Brevundimonas diminuta" /mol_type="genomic DNA" /strain="BZC3" /isolation_source="gentamicin fermentation residue" /db_xref="taxon:293" /country="China: Shandong" /collection_date="2016" protein /locus_tag="CD943_14890" /inference="COORDINATES: similar to AA sequence:RefSeq:NP_420738.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /transl_table=11 BEGIN 1 MRLSRYFLPI LKEAPSDAQI VSHQLMLRAG MIKQEAAGIY AWLPLGLRVL RKIEGIVRDE 61 QVKAGAVELL MPTLQLADLW RESGRYDAYG PEMLRITDRH ERELLYGPTN EEMVTDIFRA 121 YVKSYKALPL NLFHIQWKFR DERRPRFGVM RGREFLMKDA YSFDLDEASA RIAYKRMFAA 181 YLNTFARLGL KAVPMRADTG PIGGDLSHEF IVLAETGESE VFCDRKLVEM AAPGHNLSVE 241 QLESVFNERT ALYAATEEMH DAAQFETQTA EGDRLSARGI EVGHIFYFGT KYSAAMKAKV 301 AGPNGQDTEV HMGSYGVGVS RLLGAIIEAS HDEGGIIWPD SVAPFDVVVI NLRASDEAVS 361 AACEDAVAKL EALGKDVLYD DTDERPGGKF ATADLIGVPW QLTIGPKGLA DGVVELKRRA 421 TGEKQSLSLD AALELLTK //