LOCUS       ASD27508.1               578 aa    PRT              BCT 22-JUN-2017
DEFINITION  Brevundimonas diminuta homoserine dehydrogenase protein.
ACCESSION   CP021995-2321
PROTEIN_ID  ASD27508.1
SOURCE      Brevundimonas diminuta
  ORGANISM  Brevundimonas diminuta
            Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales;
            Caulobacteraceae; Brevundimonas.
REFERENCE   1  (bases 1 to 3385620)
  AUTHORS   Chang,H., Feng,Y., Li,Z., Xue,J. and Cheng,D.
  TITLE     Biodegradation of gentamicin by bacterial consortia AMQD4 in
            synthetic medium and raw gentamicin sewage
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 3385620)
  AUTHORS   Liu,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-JUN-2017) IARRP, CAAS, ZhongGuancun, Beijing 100081,
            China
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. 2.04
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 296.25x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 06/16/2017 13:13:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,288
            CDS (total)                       :: 3,227
            Genes (coding)                    :: 3,192
            CDS (coding)                      :: 3,192
            Genes (RNA)                       :: 61
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 35
            Pseudo Genes (ambiguous residues) :: 0 of 35
            Pseudo Genes (frameshifted)       :: 9 of 35
            Pseudo Genes (incomplete)         :: 21 of 35
            Pseudo Genes (internal stop)      :: 8 of 35
            Pseudo Genes (multiple problems)  :: 3 of 35
            ##Genome-Annotation-Data-END##
FEATURES             Qualifiers
     source          /organism="Brevundimonas diminuta"
                     /mol_type="genomic DNA"
                     /strain="BZC3"
                     /isolation_source="gentamicin fermentation residue"
                     /db_xref="taxon:293"
                     /country="China: Shandong"
                     /collection_date="2016"
     protein         /locus_tag="CD943_11785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003169003.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /transl_table=11
BEGIN
        1 MPASLALVAD QSKPVEALAS AAEVVVLKFG SSVLRDASQA PAVASEIYGH VRAGRKVVAV
       61 VSALAGQTDQ LLADARSLGL DHENELLPAY VVLGEEKAAA LVAVACDRVG LDAVGLSVRE
      121 LGIVAEGPAQ HARPVSLKGE RLHQALAEHE VVVVPGFGAV RSNGRVALLG RGGSDLTAVV
      181 LAAELGLKRV RLVKDVDGLY DRDPASETGT PLRYRRASWD TARQVGGALV QHDAIDLAEA
      241 RGVDIEVAAL GRAEGTIVGE RGAPPGPVQA AAPLKVAVAG CGVVGGGLLS RLLPDSRFEV
      301 VGVLVRNPLK KRDVSAPAEL FTNDVEALLA KKPDLVLEAL SEGEAGHALI RRALEAGCDV
      361 VSANKQAVAR DPKGLQALAD ANGCRVAWSA SVGGGSPMIE TLRAARAAGP VAGFEAVLNG
      421 TVNFMLQRLG EGATFSDALA DARAAGFAEE DPSSDLEGFD AAAKVKLLSF EAFGRSPDDL
      481 PRDVLAAETV LGDRPVRQIG ACFERDGELD PYVRLDGELE DALFLSLNGE RNALKVYGQD
      541 GRVWTCKGRG AGRWATTESV LADVADVMRA RRAAAELV
//