LOCUS ASD27466.1 569 aa PRT BCT 22-JUN-2017 DEFINITION Brevundimonas diminuta hypothetical protein protein. ACCESSION CP021995-2273 PROTEIN_ID ASD27466.1 SOURCE Brevundimonas diminuta ORGANISM Brevundimonas diminuta Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas. REFERENCE 1 (bases 1 to 3385620) AUTHORS Chang,H., Feng,Y., Li,Z., Xue,J. and Cheng,D. TITLE Biodegradation of gentamicin by bacterial consortia AMQD4 in synthetic medium and raw gentamicin sewage JOURNAL Unpublished REFERENCE 2 (bases 1 to 3385620) AUTHORS Liu,Y. TITLE Direct Submission JOURNAL Submitted (15-JUN-2017) IARRP, CAAS, ZhongGuancun, Beijing 100081, China COMMENT Annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (released 2013). Information about the Pipeline can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: SOAPdenovo v. 2.04 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 296.25x Sequencing Technology :: Illumina HiSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Date :: 06/16/2017 13:13:51 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline Annotation Method :: Best-placed reference protein set; GeneMarkS+ Annotation Software revision :: 4.2 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA; repeat_region Genes (total) :: 3,288 CDS (total) :: 3,227 Genes (coding) :: 3,192 CDS (coding) :: 3,192 Genes (RNA) :: 61 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 51 ncRNAs :: 4 Pseudo Genes (total) :: 35 Pseudo Genes (ambiguous residues) :: 0 of 35 Pseudo Genes (frameshifted) :: 9 of 35 Pseudo Genes (incomplete) :: 21 of 35 Pseudo Genes (internal stop) :: 8 of 35 Pseudo Genes (multiple problems) :: 3 of 35 ##Genome-Annotation-Data-END## FEATURES Qualifiers source /organism="Brevundimonas diminuta" /mol_type="genomic DNA" /strain="BZC3" /isolation_source="gentamicin fermentation residue" /db_xref="taxon:293" /country="China: Shandong" /collection_date="2016" protein /locus_tag="CD943_11545" /inference="COORDINATES: protein motif:HMM:PF03235.12" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /transl_table=11 BEGIN 1 MEARNKKIED WFGMIKQGQI VLPRFQRHEA WRPGQVVALL ENVLRDPPLP IGALLTLEVG 61 DNELFHSRPI VGAPEPQSKP LLHLLDGQQR MTALWRSLTG DYEGLTIFVS LDPAKQGEAD 121 AEADSEPGVD APLIEAVKRW DRKGVMQPVW ANDPVETLER GLIPVTLLRP GADGEALLDA 181 WETAVGDIAL LTAKVIKRIA ALRQRVAKYD VPFLSLNATT GRDTALNVFI RMNTSATPLK 241 DFDIVVAQLE SATGDSLHDM VEELTDAVPM ARNYGDVEDT ILSVAALLMG KPPLKKTYLD 301 RSYGEEFKSV WPRLKHGFKH GIDFLQREAL FNDRSLPSDV AVYLTCALWA DVPEHAFDTG 361 GNARTTIRKA LWRACYTDRY GKTSATRAYA DYRVLSAMVA GKDAGSCELF DETFYPLPAV 421 EELVLAGWPG RKDRLPRAIL ATGLRRGGLD FADGASISAT NFHSRELHHL FPVGVLSGDR 481 QDERVNRGLN CALITWTTNR KVGAQTPSDY IRRRAEAAHL GEDAVRQRLE SHLIPYDALV 541 GDDYDAFLLA RAERVHADMT ALCKGHSPA //