LOCUS ASD27460.1 435 aa PRT BCT 22-JUN-2017 DEFINITION Brevundimonas diminuta tRNA lysidine(34) synthetase TilS protein. ACCESSION CP021995-2266 PROTEIN_ID ASD27460.1 SOURCE Brevundimonas diminuta ORGANISM Brevundimonas diminuta Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas. REFERENCE 1 (bases 1 to 3385620) AUTHORS Chang,H., Feng,Y., Li,Z., Xue,J. and Cheng,D. TITLE Biodegradation of gentamicin by bacterial consortia AMQD4 in synthetic medium and raw gentamicin sewage JOURNAL Unpublished REFERENCE 2 (bases 1 to 3385620) AUTHORS Liu,Y. TITLE Direct Submission JOURNAL Submitted (15-JUN-2017) IARRP, CAAS, ZhongGuancun, Beijing 100081, China COMMENT Annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (released 2013). Information about the Pipeline can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: SOAPdenovo v. 2.04 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 296.25x Sequencing Technology :: Illumina HiSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Date :: 06/16/2017 13:13:51 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline Annotation Method :: Best-placed reference protein set; GeneMarkS+ Annotation Software revision :: 4.2 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA; repeat_region Genes (total) :: 3,288 CDS (total) :: 3,227 Genes (coding) :: 3,192 CDS (coding) :: 3,192 Genes (RNA) :: 61 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 51 ncRNAs :: 4 Pseudo Genes (total) :: 35 Pseudo Genes (ambiguous residues) :: 0 of 35 Pseudo Genes (frameshifted) :: 9 of 35 Pseudo Genes (incomplete) :: 21 of 35 Pseudo Genes (internal stop) :: 8 of 35 Pseudo Genes (multiple problems) :: 3 of 35 ##Genome-Annotation-Data-END## FEATURES Qualifiers source /organism="Brevundimonas diminuta" /mol_type="genomic DNA" /strain="BZC3" /isolation_source="gentamicin fermentation residue" /db_xref="taxon:293" /country="China: Shandong" /collection_date="2016" protein /gene="tilS" /locus_tag="CD943_11510" /inference="COORDINATES: protein motif:HMM:TIGR02432" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /transl_table=11 BEGIN 1 MGDLAGRDLL RRIWARLDAR LNHTGPEPVA LALSGGGDSL ALLDLAGGWA KTRGRRLLAL 61 TVDHNLHPDS ADWTRFAAEA ARAAGADWRG LAWQGARGGP GVPARARAAR HALLAEAARE 121 AGARVILTGH TADDVAEGDW MRAQGATLGR LREASPSPAW PEGRGLLLLR PVLGEERETL 181 RDHLRARGLT WLEDPANADL RYGRGRARAA LAQAEGPAAL SATVACASAA HEPGDQAWAG 241 VLPLSRGLPA SMLAAVLLCA GGGATPPRGD RLAALRARLA DGEDFTAVLC GARVEASGAH 301 VQAMREPGEW KRRPPAALAL TPGRPAVWDG RFEIVTDQSG LRVEAAAGRL AQLSDVERAV 361 LAPLPPAARA AAPVLIDPEG RPVLVWREAC VRALASRRLA LALAAFGGET TQEDGLFQSL 421 HGETPPSDLF SEKDC //