LOCUS ASD27010.1 530 aa PRT BCT 22-JUN-2017 DEFINITION Brevundimonas diminuta MFS transporter protein. ACCESSION CP021995-1775 PROTEIN_ID ASD27010.1 SOURCE Brevundimonas diminuta ORGANISM Brevundimonas diminuta Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas. REFERENCE 1 (bases 1 to 3385620) AUTHORS Chang,H., Feng,Y., Li,Z., Xue,J. and Cheng,D. TITLE Biodegradation of gentamicin by bacterial consortia AMQD4 in synthetic medium and raw gentamicin sewage JOURNAL Unpublished REFERENCE 2 (bases 1 to 3385620) AUTHORS Liu,Y. TITLE Direct Submission JOURNAL Submitted (15-JUN-2017) IARRP, CAAS, ZhongGuancun, Beijing 100081, China COMMENT Annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (released 2013). Information about the Pipeline can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: SOAPdenovo v. 2.04 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 296.25x Sequencing Technology :: Illumina HiSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Date :: 06/16/2017 13:13:51 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline Annotation Method :: Best-placed reference protein set; GeneMarkS+ Annotation Software revision :: 4.2 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA; repeat_region Genes (total) :: 3,288 CDS (total) :: 3,227 Genes (coding) :: 3,192 CDS (coding) :: 3,192 Genes (RNA) :: 61 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 51 ncRNAs :: 4 Pseudo Genes (total) :: 35 Pseudo Genes (ambiguous residues) :: 0 of 35 Pseudo Genes (frameshifted) :: 9 of 35 Pseudo Genes (incomplete) :: 21 of 35 Pseudo Genes (internal stop) :: 8 of 35 Pseudo Genes (multiple problems) :: 3 of 35 ##Genome-Annotation-Data-END## FEATURES Qualifiers source /organism="Brevundimonas diminuta" /mol_type="genomic DNA" /strain="BZC3" /isolation_source="gentamicin fermentation residue" /db_xref="taxon:293" /country="China: Shandong" /collection_date="2016" protein /locus_tag="CD943_09000" /inference="COORDINATES: similar to AA sequence:RefSeq:WP_003166599.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /transl_table=11 BEGIN 1 MSQTAVPTAA APAPADQPEI NWTVLLLGFA GMVIGQFMAI LDIQIVAASL PQIQAGVGAS 61 ADEISWIQTA YLIPEVVMIP LSGYLSRLWG TQKVFLASCL GFLVMSVAVG LSSSIEMMIV 121 FRALQGFVGG AMIPTVFAVA FTAFPPERRV TASVIMGLIV TLAPTVGPTL GGHLTEWLSW 181 RWLFFINVFP GAIVLFLVGR YAHFDKGDPS LSKGFDWLGL ALMAAFLMSL QFVLEEGAKE 241 DWFADDMILL LSVVAAVCGP AFVWRSLSYR NPIVELRAFG NRNFVVGVLM TFIVGAALFG 301 GTFLLPLFLG RVRDYSAAEV GTTMVVSGLA MFATGPIAGR LVRAVDARIL MFVGFMMAAW 361 GMWDARIVTD QWGFWEFAGV QAMRGAGVML AMIASQQVTM ATLPPHMVKN ASGLVNLSRN 421 VGGAFGLAIL NTSLTQNTAL HMVELTSAID QTHQGVRDMM AGMAVRFAGS IDPQASAMKA 481 VYGLLQKQAT TLAFGDAFAL LAIGCACAGF LTLLSKPAKP NPSAAPTDAH //