LOCUS ASD26506.1 754 aa PRT BCT 22-JUN-2017 DEFINITION Brevundimonas diminuta TonB-dependent siderophore receptor protein. ACCESSION CP021995-1205 PROTEIN_ID ASD26506.1 SOURCE Brevundimonas diminuta ORGANISM Brevundimonas diminuta Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas. REFERENCE 1 (bases 1 to 3385620) AUTHORS Chang,H., Feng,Y., Li,Z., Xue,J. and Cheng,D. TITLE Biodegradation of gentamicin by bacterial consortia AMQD4 in synthetic medium and raw gentamicin sewage JOURNAL Unpublished REFERENCE 2 (bases 1 to 3385620) AUTHORS Liu,Y. TITLE Direct Submission JOURNAL Submitted (15-JUN-2017) IARRP, CAAS, ZhongGuancun, Beijing 100081, China COMMENT Annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (released 2013). Information about the Pipeline can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: SOAPdenovo v. 2.04 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 296.25x Sequencing Technology :: Illumina HiSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Date :: 06/16/2017 13:13:51 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline Annotation Method :: Best-placed reference protein set; GeneMarkS+ Annotation Software revision :: 4.2 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA; repeat_region Genes (total) :: 3,288 CDS (total) :: 3,227 Genes (coding) :: 3,192 CDS (coding) :: 3,192 Genes (RNA) :: 61 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 51 ncRNAs :: 4 Pseudo Genes (total) :: 35 Pseudo Genes (ambiguous residues) :: 0 of 35 Pseudo Genes (frameshifted) :: 9 of 35 Pseudo Genes (incomplete) :: 21 of 35 Pseudo Genes (internal stop) :: 8 of 35 Pseudo Genes (multiple problems) :: 3 of 35 ##Genome-Annotation-Data-END## FEATURES Qualifiers source /organism="Brevundimonas diminuta" /mol_type="genomic DNA" /strain="BZC3" /isolation_source="gentamicin fermentation residue" /db_xref="taxon:293" /country="China: Shandong" /collection_date="2016" protein /locus_tag="CD943_06115" /inference="COORDINATES: similar to AA sequence:RefSeq:WP_003166139.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /transl_table=11 BEGIN 1 MSDTRSAALK ALLFASSAAG MLCAAPAIAA TDEAAPADGV ISQDATNLGT VDVHGHRVKR 61 EPKDPQFVTP LVDTPRTVTV IPQQIIEQTA ATSLQDILRT SPGITFGAGE GGQPLADRPF 121 IRGQASGNNI FVDGIRDTGG QQREVFNLEQ VEVIKGADSV YSGRGSGGGS INLGSKSPRL 181 TNFVHGSAGV GTDDYLRGTV DANWQVGPTA AMRLNVMTSQ GDVPGRNGVD FDKWGVGAAV 241 AVGLGAPTTL TASYYHLDSN QTPDYGIPLY TKLGGANAPR PDASGVLDVP YDSFYGLKAR 301 DYLNNTVDSL TLEVEHRFSD TLALRNVTRY SQTLNDYVVT NPGDGGAAQQ INGVWWMKRG 361 LKSRWNPAET LANVTDLHGS FLTGSIKHDF DVGLELSREK NRNASYTVTT LTGTACPAPL 421 TGLDCTQVYA PNPNDPWTGT ITRGTETYSD TDALGLYAFD SISLGERWKL NLGLRYDRYD 481 VEGTELPRGA TAPVMREADW DFVNYQVGLV YKPTASSSVY ASFSTASTPP TISAGDQNGV 541 GGVGSGNLAS TVLDPEQTES FEIGAKANLF DDRLALSGAL FHLTRKDAAI EVEPGLFEQA 601 GETRVQGVEL GVSGNITDKW QVFGGYTWMD SELVRGAYSS VNLGDPLANT PEHSASLFTT 661 YRVLPKLSLG GGVYYVSKSW GGNQGGAGGG ANRVYAPEYT RVDLFASYDI SDRASLQLNV 721 QNAGDEEYII RTNGVHHADV APARQAILTL NVRY //