LOCUS ASD26430.1 626 aa PRT BCT 22-JUN-2017 DEFINITION Brevundimonas diminuta DNA primase protein. ACCESSION CP021995-1122 PROTEIN_ID ASD26430.1 SOURCE Brevundimonas diminuta ORGANISM Brevundimonas diminuta Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas. REFERENCE 1 (bases 1 to 3385620) AUTHORS Chang,H., Feng,Y., Li,Z., Xue,J. and Cheng,D. TITLE Biodegradation of gentamicin by bacterial consortia AMQD4 in synthetic medium and raw gentamicin sewage JOURNAL Unpublished REFERENCE 2 (bases 1 to 3385620) AUTHORS Liu,Y. TITLE Direct Submission JOURNAL Submitted (15-JUN-2017) IARRP, CAAS, ZhongGuancun, Beijing 100081, China COMMENT Annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (released 2013). Information about the Pipeline can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: SOAPdenovo v. 2.04 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 296.25x Sequencing Technology :: Illumina HiSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Date :: 06/16/2017 13:13:51 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline Annotation Method :: Best-placed reference protein set; GeneMarkS+ Annotation Software revision :: 4.2 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA; repeat_region Genes (total) :: 3,288 CDS (total) :: 3,227 Genes (coding) :: 3,192 CDS (coding) :: 3,192 Genes (RNA) :: 61 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 51 ncRNAs :: 4 Pseudo Genes (total) :: 35 Pseudo Genes (ambiguous residues) :: 0 of 35 Pseudo Genes (frameshifted) :: 9 of 35 Pseudo Genes (incomplete) :: 21 of 35 Pseudo Genes (internal stop) :: 8 of 35 Pseudo Genes (multiple problems) :: 3 of 35 ##Genome-Annotation-Data-END## FEATURES Qualifiers source /organism="Brevundimonas diminuta" /mol_type="genomic DNA" /strain="BZC3" /isolation_source="gentamicin fermentation residue" /db_xref="taxon:293" /country="China: Shandong" /collection_date="2016" protein /locus_tag="CD943_05700" /inference="COORDINATES: similar to AA sequence:RefSeq:WP_013268424.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /transl_table=11 BEGIN 1 MRFDERFIEE LKARLRPSDI IGRTVKLKRQ GREFVGLSPF SKEKSPSFFV NDDKGFFHDF 61 SSGKHGDVIS FLQETERLSF VEAVSRLAGE AGMQLPAEDP QAAEREQKRQ GLADWMDLAQ 121 KWFAANLRRS VGKAAREYLE KRGLPEDQWE RFGLGYAPND REGLKQALIQ RGARPGDLVE 181 AGLLIAPEGG GQPYDRFRDR LMFPILDARG RIVSFGGRAM NPDDRAKYLN GPETSLFHKG 241 ATLYGLPEAR RIMGAESRGE QGIIVVEGYM DVIACHRAGL PAVAPMGTAL TEEQMERLWR 301 VSAEPVLSFD GDAAGLRAAY RSIERALPLL KPGKSFRFAL LEGGQDPDDI LRDRGAPALR 361 QAMATTRPFA EVLFRREVEA EPLDTPERKA GLKGRLRQAA NAVQDKDLAE QYRRDLFDRF 421 DALFPRQQQQ RPPQSGGRPG PGGRWRGPPP LQGQTVEGAQ AMQALFRSVE PIAAALAHGA 481 IDDPERLDDH MEAVARYGFG DPALDGLAQE LVRLRFSGRT LDSAALRRHL AQSGHDALMH 541 EVEKAAAKSG APFLAADKPL GEARIRWSQA FDALTRAAAL DEALASAKSE AHRAFDNSAF 601 ALVKAERDAL RRAIKTGTIW EDAASS //