LOCUS ASD25889.1 404 aa PRT BCT 22-JUN-2017 DEFINITION Brevundimonas diminuta type II secretion system protein GspF protein. ACCESSION CP021995-521 PROTEIN_ID ASD25889.1 SOURCE Brevundimonas diminuta ORGANISM Brevundimonas diminuta Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas. REFERENCE 1 (bases 1 to 3385620) AUTHORS Chang,H., Feng,Y., Li,Z., Xue,J. and Cheng,D. TITLE Biodegradation of gentamicin by bacterial consortia AMQD4 in synthetic medium and raw gentamicin sewage JOURNAL Unpublished REFERENCE 2 (bases 1 to 3385620) AUTHORS Liu,Y. TITLE Direct Submission JOURNAL Submitted (15-JUN-2017) IARRP, CAAS, ZhongGuancun, Beijing 100081, China COMMENT Annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (released 2013). Information about the Pipeline can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: SOAPdenovo v. 2.04 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 296.25x Sequencing Technology :: Illumina HiSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Date :: 06/16/2017 13:13:51 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline Annotation Method :: Best-placed reference protein set; GeneMarkS+ Annotation Software revision :: 4.2 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA; repeat_region Genes (total) :: 3,288 CDS (total) :: 3,227 Genes (coding) :: 3,192 CDS (coding) :: 3,192 Genes (RNA) :: 61 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 51 ncRNAs :: 4 Pseudo Genes (total) :: 35 Pseudo Genes (ambiguous residues) :: 0 of 35 Pseudo Genes (frameshifted) :: 9 of 35 Pseudo Genes (incomplete) :: 21 of 35 Pseudo Genes (internal stop) :: 8 of 35 Pseudo Genes (multiple problems) :: 3 of 35 ##Genome-Annotation-Data-END## FEATURES Qualifiers source /organism="Brevundimonas diminuta" /mol_type="genomic DNA" /strain="BZC3" /isolation_source="gentamicin fermentation residue" /db_xref="taxon:293" /country="China: Shandong" /collection_date="2016" protein /gene="gspF" /locus_tag="CD943_02660" /inference="COORDINATES: similar to AA sequence:RefSeq:WP_003169991.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /transl_table=11 BEGIN 1 MAAFDYIAAD AAGRTVRGSL SAVDEAAARK ALAKRQLAPL QLSPGRSGAV SAPSKAGKAG 61 RLSPKALALT TRQLATLISV SPLEEALRNL MLQADRPNVR RVLEGVHAGV IEGRRLSDAM 121 GQQGAAFPPL YRAMTAAGEQ SGALQPILER LADGLERDEV MRGKVLTALV YPCVLAVVAL 181 GVIVAMMTYI VPKVVDQFYS MGQTLPLLTR LVIGLSDLMR DWGWLMALIL AAVVAAGLIA 241 RRREAVRLRL DAWVLRLPLI GRLTRDLHGA RMARTLSTMI AAGLPVLEGL TITARTVSNR 301 ALRRATEQMA EAVREGGGLS AAMRRAEVFP PILVYMTASG ESSGRLEPML ERAADYLERE 361 FSNFTAVMLS LLEPAIIVVM GGIVAVIVLS ILLPILQINT LALG //