LOCUS ASD25659.1 600 aa PRT BCT 22-JUN-2017 DEFINITION Brevundimonas diminuta single-stranded-DNA-specific exonuclease RecJ protein. ACCESSION CP021995-269 PROTEIN_ID ASD25659.1 SOURCE Brevundimonas diminuta ORGANISM Brevundimonas diminuta Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas. REFERENCE 1 (bases 1 to 3385620) AUTHORS Chang,H., Feng,Y., Li,Z., Xue,J. and Cheng,D. TITLE Biodegradation of gentamicin by bacterial consortia AMQD4 in synthetic medium and raw gentamicin sewage JOURNAL Unpublished REFERENCE 2 (bases 1 to 3385620) AUTHORS Liu,Y. TITLE Direct Submission JOURNAL Submitted (15-JUN-2017) IARRP, CAAS, ZhongGuancun, Beijing 100081, China COMMENT Annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (released 2013). Information about the Pipeline can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: SOAPdenovo v. 2.04 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 296.25x Sequencing Technology :: Illumina HiSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Date :: 06/16/2017 13:13:51 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline Annotation Method :: Best-placed reference protein set; GeneMarkS+ Annotation Software revision :: 4.2 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA; repeat_region Genes (total) :: 3,288 CDS (total) :: 3,227 Genes (coding) :: 3,192 CDS (coding) :: 3,192 Genes (RNA) :: 61 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 51 ncRNAs :: 4 Pseudo Genes (total) :: 35 Pseudo Genes (ambiguous residues) :: 0 of 35 Pseudo Genes (frameshifted) :: 9 of 35 Pseudo Genes (incomplete) :: 21 of 35 Pseudo Genes (internal stop) :: 8 of 35 Pseudo Genes (multiple problems) :: 3 of 35 ##Genome-Annotation-Data-END## FEATURES Qualifiers source /organism="Brevundimonas diminuta" /mol_type="genomic DNA" /strain="BZC3" /isolation_source="gentamicin fermentation residue" /db_xref="taxon:293" /country="China: Shandong" /collection_date="2016" protein /gene="recJ" /locus_tag="CD943_01395" /inference="COORDINATES: similar to AA sequence:RefSeq:WP_013269324.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /transl_table=11 BEGIN 1 MADGAVSPAF LDVSRSLSGR AWRLRPAEAG VTRAHIQALG LDEPLARALA SRKVAAEQGA 61 DFLKPTLKAL FPNPSSFMDM DAAAAAIVDA LQAQASIHVF ADYDVDGASS AALLVRWFRT 121 LGADLPIYVP DRLTEGYGPS ARAFDTLKAS GADLVITVDC GAAANEAVAH AAAIGLKVVV 181 IDHHMMREEP PACLAVVNPN RPGCGSGQGN LAAAGVVFVL LAALNREARG RGLFEGKAEP 241 DIRQWLDLAA MGAICDVTGL TGFNRALTSL GLGVMSHWRN PGLRALLAAA GAEPGPAKTN 301 HAGFILGPRI NAGGRIGKSD LGARLLSTDD PDEARMLAQE LDALNVARRE VEAEVTEQAV 361 RRVEATGAHA DDSAAVVVSG EDWHPGVVGI VAGRLRERWR KPVIVIGVDA VNGVGKGSGR 421 SQPGMNLGRA VQAAWNEGLL IAGGGHAMAA GLTVAADRID ELRAFLNERL SAERVEAVAQ 481 DWVEVDALID PRAATRDLFE AFEQLAPYGP ANPEPLFALE GVQAREPVAM NGGHVRCRLV 541 GPDGASVRAI AWRCADLPTG KALLAGQGGL NVVGRLRADD WNGRRGVQFE IEDVADPRMA //