LOCUS ASD25492.1 982 aa PRT BCT 22-JUN-2017 DEFINITION Brevundimonas diminuta histidine kinase protein. ACCESSION CP021995-78 PROTEIN_ID ASD25492.1 SOURCE Brevundimonas diminuta ORGANISM Brevundimonas diminuta Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas. REFERENCE 1 (bases 1 to 3385620) AUTHORS Chang,H., Feng,Y., Li,Z., Xue,J. and Cheng,D. TITLE Biodegradation of gentamicin by bacterial consortia AMQD4 in synthetic medium and raw gentamicin sewage JOURNAL Unpublished REFERENCE 2 (bases 1 to 3385620) AUTHORS Liu,Y. TITLE Direct Submission JOURNAL Submitted (15-JUN-2017) IARRP, CAAS, ZhongGuancun, Beijing 100081, China COMMENT Annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (released 2013). Information about the Pipeline can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: SOAPdenovo v. 2.04 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 296.25x Sequencing Technology :: Illumina HiSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Date :: 06/16/2017 13:13:51 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline Annotation Method :: Best-placed reference protein set; GeneMarkS+ Annotation Software revision :: 4.2 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA; repeat_region Genes (total) :: 3,288 CDS (total) :: 3,227 Genes (coding) :: 3,192 CDS (coding) :: 3,192 Genes (RNA) :: 61 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 51 ncRNAs :: 4 Pseudo Genes (total) :: 35 Pseudo Genes (ambiguous residues) :: 0 of 35 Pseudo Genes (frameshifted) :: 9 of 35 Pseudo Genes (incomplete) :: 21 of 35 Pseudo Genes (internal stop) :: 8 of 35 Pseudo Genes (multiple problems) :: 3 of 35 ##Genome-Annotation-Data-END## FEATURES Qualifiers source /organism="Brevundimonas diminuta" /mol_type="genomic DNA" /strain="BZC3" /isolation_source="gentamicin fermentation residue" /db_xref="taxon:293" /country="China: Shandong" /collection_date="2016" protein /locus_tag="CD943_00395" /inference="COORDINATES: protein motif:HMM:PF02518.24,HMM:PF13589.4" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /transl_table=11 BEGIN 1 MTADKISAGS VPFRTRARTI DHLGREQIAD VPTAVSELWK NAYDAYARRV SLHIYTRLSP 61 VAAIFDDGHG MSREDFVGRW LVVGTESKAS DDVTDVALRN GLPPRPRQGQ KGIGRLSVAA 121 IGSAVLVVSR KAGHPFVAGL LDWRVFENPY LLLEDISVPV VEFTSVDDLP EQLPILRQRL 181 LENLGTGVVV PERRDRLVRG WAMYTELEAR RDPKAPPTAT RIMELAEAGL PDAVPLSDWL 241 MSNGAGSGTA LLLADLNPFL TAWVRGGAGG VAETDTIMRK SMQRVLSGFS DPYVDDDLSL 301 DYRVVVHRGE DDETVVARDP DYGVEFLRSL DHFVDGRFDE FGVFKGSVRA FGKDFGDVEI 361 IPSQTPPTGG RDRVGAFDLA IGAYEPDPKN SILTPDVHAR VASRAEDHSG LNVYRDGLRV 421 MPYGRPENDF FKIEERRSVN AGRNFWSSRR MFGRIAITRA GNPNLRDKAG REGLIDNNAS 481 RAIQVLMIGL LTQLAKRFFG SESSVREELL PAIQAENKVA GDKAKAIRGR TLKVFRDAVR 541 ERTPALDKSL VELEATRRLL DEAVAAEDVG RLWSLGTTIE GLVTARTAMR LPTQPRSLGS 601 FEKQYRLYRD RYAAFASGLD EVRETWRIEA ERLDAKPDPA AARSHLGRNQ KAVTDMLSRW 661 RREILAVLSS EQKRVDGQID EDMGEFYKRA APLLSQIEAG EMPLAQALAQ MDSLREQLTE 721 RFATTYDPYL RSVEQLSEGL DLDSALSYSD ARQDSLEVQI SRVQALAQVG ISVEILTHEL 781 NSLNRRLERA MSALPAEARS MAAFREADDA RRELVERLRF LSQMQIADGD AKRSISGEDV 841 FAYVSTFFER ALQERSIELS ATPEFLSARF NEFPSRIFPV FINLVNNAIY WVAEAPSKRI 901 LLAVVDDRLV VGDSGPGIDD DDVPNLFELF FTRRIRGRGV GLYLCRQTLA AGGHSIEYVT 961 DTAAKILPGA NFAITLRDGI ND //