LOCUS       ASD25492.1               982 aa    PRT              BCT 22-JUN-2017
DEFINITION  Brevundimonas diminuta histidine kinase protein.
ACCESSION   CP021995-78
PROTEIN_ID  ASD25492.1
SOURCE      Brevundimonas diminuta
  ORGANISM  Brevundimonas diminuta
            Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales;
            Caulobacteraceae; Brevundimonas.
REFERENCE   1  (bases 1 to 3385620)
  AUTHORS   Chang,H., Feng,Y., Li,Z., Xue,J. and Cheng,D.
  TITLE     Biodegradation of gentamicin by bacterial consortia AMQD4 in
            synthetic medium and raw gentamicin sewage
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 3385620)
  AUTHORS   Liu,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-JUN-2017) IARRP, CAAS, ZhongGuancun, Beijing 100081,
            China
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. 2.04
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 296.25x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 06/16/2017 13:13:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,288
            CDS (total)                       :: 3,227
            Genes (coding)                    :: 3,192
            CDS (coding)                      :: 3,192
            Genes (RNA)                       :: 61
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 35
            Pseudo Genes (ambiguous residues) :: 0 of 35
            Pseudo Genes (frameshifted)       :: 9 of 35
            Pseudo Genes (incomplete)         :: 21 of 35
            Pseudo Genes (internal stop)      :: 8 of 35
            Pseudo Genes (multiple problems)  :: 3 of 35
            ##Genome-Annotation-Data-END##
FEATURES             Qualifiers
     source          /organism="Brevundimonas diminuta"
                     /mol_type="genomic DNA"
                     /strain="BZC3"
                     /isolation_source="gentamicin fermentation residue"
                     /db_xref="taxon:293"
                     /country="China: Shandong"
                     /collection_date="2016"
     protein         /locus_tag="CD943_00395"
                     /inference="COORDINATES: protein
                     motif:HMM:PF02518.24,HMM:PF13589.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /transl_table=11
BEGIN
        1 MTADKISAGS VPFRTRARTI DHLGREQIAD VPTAVSELWK NAYDAYARRV SLHIYTRLSP
       61 VAAIFDDGHG MSREDFVGRW LVVGTESKAS DDVTDVALRN GLPPRPRQGQ KGIGRLSVAA
      121 IGSAVLVVSR KAGHPFVAGL LDWRVFENPY LLLEDISVPV VEFTSVDDLP EQLPILRQRL
      181 LENLGTGVVV PERRDRLVRG WAMYTELEAR RDPKAPPTAT RIMELAEAGL PDAVPLSDWL
      241 MSNGAGSGTA LLLADLNPFL TAWVRGGAGG VAETDTIMRK SMQRVLSGFS DPYVDDDLSL
      301 DYRVVVHRGE DDETVVARDP DYGVEFLRSL DHFVDGRFDE FGVFKGSVRA FGKDFGDVEI
      361 IPSQTPPTGG RDRVGAFDLA IGAYEPDPKN SILTPDVHAR VASRAEDHSG LNVYRDGLRV
      421 MPYGRPENDF FKIEERRSVN AGRNFWSSRR MFGRIAITRA GNPNLRDKAG REGLIDNNAS
      481 RAIQVLMIGL LTQLAKRFFG SESSVREELL PAIQAENKVA GDKAKAIRGR TLKVFRDAVR
      541 ERTPALDKSL VELEATRRLL DEAVAAEDVG RLWSLGTTIE GLVTARTAMR LPTQPRSLGS
      601 FEKQYRLYRD RYAAFASGLD EVRETWRIEA ERLDAKPDPA AARSHLGRNQ KAVTDMLSRW
      661 RREILAVLSS EQKRVDGQID EDMGEFYKRA APLLSQIEAG EMPLAQALAQ MDSLREQLTE
      721 RFATTYDPYL RSVEQLSEGL DLDSALSYSD ARQDSLEVQI SRVQALAQVG ISVEILTHEL
      781 NSLNRRLERA MSALPAEARS MAAFREADDA RRELVERLRF LSQMQIADGD AKRSISGEDV
      841 FAYVSTFFER ALQERSIELS ATPEFLSARF NEFPSRIFPV FINLVNNAIY WVAEAPSKRI
      901 LLAVVDDRLV VGDSGPGIDD DDVPNLFELF FTRRIRGRGV GLYLCRQTLA AGGHSIEYVT
      961 DTAAKILPGA NFAITLRDGI ND
//