LOCUS ASD25456.1 720 aa PRT BCT 22-JUN-2017 DEFINITION Brevundimonas diminuta ABC transporter protein. ACCESSION CP021995-37 PROTEIN_ID ASD25456.1 SOURCE Brevundimonas diminuta ORGANISM Brevundimonas diminuta Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas. REFERENCE 1 (bases 1 to 3385620) AUTHORS Chang,H., Feng,Y., Li,Z., Xue,J. and Cheng,D. TITLE Biodegradation of gentamicin by bacterial consortia AMQD4 in synthetic medium and raw gentamicin sewage JOURNAL Unpublished REFERENCE 2 (bases 1 to 3385620) AUTHORS Liu,Y. TITLE Direct Submission JOURNAL Submitted (15-JUN-2017) IARRP, CAAS, ZhongGuancun, Beijing 100081, China COMMENT Annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (released 2013). Information about the Pipeline can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: SOAPdenovo v. 2.04 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 296.25x Sequencing Technology :: Illumina HiSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Date :: 06/16/2017 13:13:51 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline Annotation Method :: Best-placed reference protein set; GeneMarkS+ Annotation Software revision :: 4.2 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA; repeat_region Genes (total) :: 3,288 CDS (total) :: 3,227 Genes (coding) :: 3,192 CDS (coding) :: 3,192 Genes (RNA) :: 61 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 51 ncRNAs :: 4 Pseudo Genes (total) :: 35 Pseudo Genes (ambiguous residues) :: 0 of 35 Pseudo Genes (frameshifted) :: 9 of 35 Pseudo Genes (incomplete) :: 21 of 35 Pseudo Genes (internal stop) :: 8 of 35 Pseudo Genes (multiple problems) :: 3 of 35 ##Genome-Annotation-Data-END## FEATURES Qualifiers source /organism="Brevundimonas diminuta" /mol_type="genomic DNA" /strain="BZC3" /isolation_source="gentamicin fermentation residue" /db_xref="taxon:293" /country="China: Shandong" /collection_date="2016" protein /locus_tag="CD943_00190" /inference="COORDINATES: similar to AA sequence:RefSeq:NP_419501.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /transl_table=11 BEGIN 1 MAAGSPVCGR EALMSPLSEL NFSRRQRLPV IQGAEAAECG LVCLTMVARW HGHDVDLNGL 61 RQRFSISMAG ATLRSIMAMA DQLGLAPRAL RVELTALDRV RTPAILHWDL NHFVVLKRVR 121 GGKAVIHDPA LGARTYSLDD LSRHFTGVVL ELSPSASFEK VSARAPISLN SLWSRMSGLW 181 PAMFQILGLS VALQVAAFAM PFQMQLVVDE ALMRGDRNLL TVLALGFGGL VVVQALIEAL 241 RGWALQVFGH MLGYQMVGNL VRHLMRLRAD WFEKRHVGDI LSRIGSAAAI QDVLTRGVVS 301 AIIDGGMALV AMIILWLYSP TLAMVVIGTV AISMVLAMIM FPALKARTHE RIIEEAREQS 361 HIMETVRAAT TIKIMGREAE RESAWRNLYA NVINASVSVG KLQISLSLVQ GLISGLQTVL 421 VVYLGARIIL AGDGFSVGML IAFLSFRQTF TDRVTALINQ VIQFRFLNLH LERLADIVTA 481 EPEVADEPPP DLNVQGQVCF RKVSFQYGAA DREILKALDL EIAAGEFVAI TGASGGGKST 541 LVKVLLGLVS PTSGRVELDG QVAGAALWRA WREKVGVVSQ DDRLLSGTIA DNIAFFDPDL 601 DMGRVQQAAM AARIHDDIAR MPMQYLSLVG DMGSSLSGGQ RQRLLLARAL YRQPSVLILD 661 EGTANLDVET EEVIADLIAK LPVTRIVVAH RPALLRRADR VFVLKDGRVE APTEEVRLSA //