LOCUS ARV74326.1 533 aa PRT BCT 02-JUN-2017 DEFINITION Vibrio campbellii CAIM 519 = NBRC 15631 = ATCC 25920 type VI secretion system ImpA domain-containing protein protein. ACCESSION CP015864-373 PROTEIN_ID ARV74326.1 SOURCE Vibrio campbellii CAIM 519 = NBRC 15631 = ATCC 25920 ORGANISM Vibrio campbellii CAIM 519 = NBRC 15631 = ATCC 25920 Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio. REFERENCE 1 (bases 1 to 1850375) AUTHORS Wang,Z. and Vora,G.J. TITLE Complete genome of Vibrio campbellii type strain (ATCC 25920; CAIM 519T) JOURNAL Unpublished REFERENCE 2 (bases 1 to 1850375) AUTHORS Wang,Z. and Vora,G.J. TITLE Direct Submission JOURNAL Submitted (25-MAY-2016) Center for Bio/Molecular Science & Engineering, Code 6900, Naval Research Laboratory, 4555 Overlook Avenue, SW, Washington, DC 20375, USA COMMENT Annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (released 2013). Information about the Pipeline can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: SMRT Analysis v. 2.3.0 HGAP.2 Reference-guided Assembly :: CP006606.1 Genome Coverage :: 23x Sequencing Technology :: PacBio RS II ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Date :: 05/25/2016 17:47:01 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline Annotation Method :: Best-placed reference protein set; GeneMarkS+ Annotation Software revision :: 3.2 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA; repeat_region Genes (total) :: 4,754 CDS (total) :: 4,578 Genes (coding) :: 4,479 CDS (coding) :: 4,479 Genes (RNA) :: 176 rRNAs :: 13, 12, 12 (5S, 16S, 23S) complete rRNAs :: 13, 12, 12 (5S, 16S, 23S) tRNAs :: 134 ncRNAs :: 5 Pseudo Genes (total) :: 99 Pseudo Genes (ambiguous residues) :: 0 of 99 Pseudo Genes (frameshifted) :: 51 of 99 Pseudo Genes (incomplete) :: 31 of 99 Pseudo Genes (internal stop) :: 40 of 99 Pseudo Genes (multiple problems) :: 20 of 99 ##Genome-Annotation-Data-END## FEATURES Qualifiers source /organism="Vibrio campbellii CAIM 519 = NBRC 15631 = ATCC 25920" /mol_type="genomic DNA" /strain="ATCC 25920, CAIM 519T" /isolation_source="Ocean" /db_xref="taxon:1224742" /chromosome="2" /country="USA: Hawaii" protein /locus_tag="A8140_16810" /inference="EXISTENCE: similar to AA sequence:RefSeq:WP_004748721.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /transl_table=11 BEGIN 1 MSVIDIERLL TPISDAAPVG EDARYEFCYE MMESEVKKFG SLFGETVDWT VVKTHATEVL 61 VQHSKDLKAI CYLIRALTEE FGLQGFEQGL KLLSHALSQF GGELYPSRKR GRDGAVEWLN 121 HQFKLVSGKL AESPQSWALV SSCISTIEEV QRQYDDVYQD SEADFFEIRT QLNMLSQQAA 181 VDGQSDDGSA SEVQPEQAPS VPVSTTQPEQ TNTAVDSPKP EEAQSAPVKP LSPVPKPAPV 241 KKAVTQEVDV DTDFSSPTAS KRTLKKVAEV MIHANPSDPL AYRIYRHLTW DDIDGLPDHQ 301 NNETPLSLAV SSDQQADYRD KANQESDIDT IKRLERTLTD APFWLTGHHF VYSMLNNLGF 361 DDAAIAVKQE VKRFVDSLEG IEHLSFKNSI PFADEATLSW LSTQDAASST SQPVVQTVVI 421 SEEDSLPMED ITLENLGEYA AELARKLELD SSGRGQFMLY LQLIAAYQSV GLYPLCLPYL 481 EKGWEVQKAF NLASWEPHLS SQLEDLIRKT LHQLFRSKDL LPEKYEEWQA IYD //