LOCUS ARV71278.1 507 aa PRT BCT 02-JUN-2017 DEFINITION Vibrio campbellii CAIM 519 = NBRC 15631 = ATCC 25920 ATP- dependent protease protein. ACCESSION CP015863-83 PROTEIN_ID ARV71278.1 SOURCE Vibrio campbellii CAIM 519 = NBRC 15631 = ATCC 25920 ORGANISM Vibrio campbellii CAIM 519 = NBRC 15631 = ATCC 25920 Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio. REFERENCE 1 (bases 1 to 3253249) AUTHORS Wang,Z. and Vora,G.J. TITLE Complete genome of Vibrio campbellii type strain (ATCC 25920; CAIM 519T) JOURNAL Unpublished REFERENCE 2 (bases 1 to 3253249) AUTHORS Wang,Z. and Vora,G.J. TITLE Direct Submission JOURNAL Submitted (25-MAY-2016) Center for Bio/Molecular Science & Engineering, Code 6900, Naval Research Laboratory, 4555 Overlook Avenue, SW, Washington, DC 20375, USA COMMENT Annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (released 2013). Information about the Pipeline can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: SMRT Analysis v. 2.3.0 HGAP.2 Reference-guided Assembly :: CP006605.1 Genome Coverage :: 23x Sequencing Technology :: PacBio RS II ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Date :: 05/25/2016 17:47:01 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline Annotation Method :: Best-placed reference protein set; GeneMarkS+ Annotation Software revision :: 3.2 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA; repeat_region Genes (total) :: 4,754 CDS (total) :: 4,578 Genes (coding) :: 4,479 CDS (coding) :: 4,479 Genes (RNA) :: 176 rRNAs :: 13, 12, 12 (5S, 16S, 23S) complete rRNAs :: 13, 12, 12 (5S, 16S, 23S) tRNAs :: 134 ncRNAs :: 5 Pseudo Genes (total) :: 99 Pseudo Genes (ambiguous residues) :: 0 of 99 Pseudo Genes (frameshifted) :: 51 of 99 Pseudo Genes (incomplete) :: 31 of 99 Pseudo Genes (internal stop) :: 40 of 99 Pseudo Genes (multiple problems) :: 20 of 99 ##Genome-Annotation-Data-END## FEATURES Qualifiers source /organism="Vibrio campbellii CAIM 519 = NBRC 15631 = ATCC 25920" /mol_type="genomic DNA" /strain="ATCC 25920, CAIM 519T" /isolation_source="Ocean" /db_xref="taxon:1224742" /chromosome="1" /country="USA: Hawaii" protein /locus_tag="A8140_00475" /inference="EXISTENCE: similar to AA sequence:RefSeq:WP_020430404.1" /note="among the AAA+ ATPases, the YifB protease family belongs to the Helix 2 insert clade; unknown function; Derived by automated computational analysis using gene prediction method: Protein Homology." /transl_table=11 BEGIN 1 MGLAIIHSRA SVGVQAPSVS VEVHISNGMP GFTLVGLPET TVKESKDRVR SAIVNSNFQF 61 PAKRITVNLA PADLPKEGGR FDLPIALGIL AASEQIATDK LKNYEFVGEL ALSGGLRTVK 121 GVLPAALAAN KKQRHLVVPH ANGDQAALVG KEQHKSAQSL LEVCAELCGQ HQLNLYQTPK 181 KKELKAHGRD LQDIIGQQQG KRALEIAAAG NHNLLFLGPP GTGKTMLASR LCDLLPEMSD 241 EEAMETASVA SLTQSEINEH NWKTRPFRAP HHSSSMAALV GGGSVPRPGE ISLAHNGLLF 301 LDEMPEFDRK VLDSLREPLE SGEIIISRAQ GKTRFPARFQ IVGALNPSPT GYYEGNQART 361 NPQAILRYLG RLSGPLLDRF DMSLEIPALP KGTLSEGGDR GEPTAIVKER VNQARDCMLA 421 RSGKVNALLG SREIEAFCPL QKSDAEFLEN ALHRLGLSIR AYHRIIKVAR TIADLEGSPQ 481 IERTHLAEAL GYRAMDRLLK QLTAQAV //