LOCUS       ARN72072.1               667 aa    PRT              BCT 02-MAY-2017
DEFINITION  Nonlabens tegetincola succinate dehydrogenase flavoprotein
            subunit protein.
ACCESSION   CP019342-2079
PROTEIN_ID  ARN72072.1
SOURCE      Nonlabens tegetincola
  ORGANISM  Nonlabens tegetincola
            Bacteria; Bacteroidota; Flavobacteriia; Flavobacteriales;
            Flavobacteriaceae; Nonlabens.
REFERENCE   1  (bases 1 to 2835711)
  AUTHORS   Kumagai,Y.
  TITLE     Trade-off between light-utilization and light-protection in marine
            flavobacteria
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2835711)
  AUTHORS   Kumagai,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (19-JAN-2017) Marine Microbiology, Atmosphere and Ocean
            Research Institute, The University of Tokyo, 5-1-5, Kashiwanoha,
            Kashiwa-shi, Chiba 277-8564, Japan
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Sprai v. 0.9.5.1.3
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 37.72x
            Sequencing Technology  :: PacBio
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/24/2017 14:22:44
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.0
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 2,581
            CDS (total)                       :: 2,532
            Genes (coding)                    :: 2,475
            CDS (coding)                      :: 2,475
            Genes (RNA)                       :: 49
            rRNAs                             :: 3, 3, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 3, 3 (5S, 16S, 23S)
            tRNAs                             :: 36
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 57
            Pseudo Genes (ambiguous residues) :: 0 of 57
            Pseudo Genes (frameshifted)       :: 54 of 57
            Pseudo Genes (incomplete)         :: 2 of 57
            Pseudo Genes (internal stop)      :: 2 of 57
            Pseudo Genes (multiple problems)  :: 1 of 57
            ##Genome-Annotation-Data-END##
FEATURES             Qualifiers
     source          /organism="Nonlabens tegetincola"
                     /mol_type="genomic DNA"
                     /strain="NBRC 100970"
                     /isolation_source="marine sediment"
                     /culture_collection="NBRC:100970"
                     /type_material="type strain of Sandarakinotalea sediminis"
                     /db_xref="taxon:323273"
                     /country="Japan: Katsuura"
     protein         /gene="sdhA"
                     /locus_tag="BST91_10610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014032767.1"
                     /note="part of four member succinate dehydrogenase enzyme
                     complex that forms a trimeric complex (trimer of
                     tetramers); SdhA/B are the catalytic subcomplex and can
                     exhibit succinate dehydrogenase activity in the absence of
                     SdhC/D which are the membrane components and form
                     cytochrome b556; SdhC binds ubiquinone; oxidizes succinate
                     to fumarate while reducing ubiquinone to ubiquinol;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /transl_table=11
BEGIN
        1 MSVLDSKVPS GPLADKWTKH KNTINLVNPA NKRLIDVIVV GTGLAGGSAA ATLAELGYNV
       61 KTFCYNDSPR RAHSIAAQGG INAAKNYQGD GDSNFRLFYD TIKGGDYRSR EANVHRLAEV
      121 SGNIIDQCVA QGVPFAREYG GLLDNRSFGG VLVSRTFYAA GQTGQQLLLG AYSALNRQIN
      181 RGKVQPFNRH EMLDLVVVDG KARGIIARNL VTGEIERHGA HAVVIASGGY GNVFFLSTNA
      241 MGSNVMAAWR THRRGAFFAN PCFTQIHPTC IPVSGEHQSK LTLMSESLRN DGRIWVPKDL
      301 EDAKAIREGR LRGVDLPEEK RDYYLERRYP AFGNLVPRDV ASRAAKERCD AGYGVNKTGN
      361 AVYLDFAASF LRYGKIEALT SGKKNATEEE MIALGKKVIE KKYGNLFDMY RNITDDNPYE
      421 VPMKIFPAVH YTMGGLWVDY NLQTTVPGCF AAGEANFSDH GANRLGASAL MQGLADGYFV
      481 LPYTIGDYLS NEIRTGEIST DTPEFDEAEK DVRNRISKLM NGSGKHSVDY YHKKLGLIMW
      541 NKCGMSRNEK ELKEAMDEIA ELRADFWQNV RVPGSADTKN QELEKAGRVA DFLELGELFA
      601 KDALDRNESC GGHFREEYQT EEGEALRDDE NYTYVSAWEY NENPREAKLH KENLVFENVE
      661 LKTRSYK
//